{"id":"W3093831501","doi":"10.1101/2020.10.23.352302","title":"Free-living psychrophilic bacteria of the genus <i>Psychrobacter</i> are descendants of pathobionts","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Nunavut Wildlife Management Board; Max-Planck-Gesellschaft; Nunavut General Monitoring Plan","keywords":"Biology; Psychrophile; Genome; Phylogenetics; Zoology; Proteobacteria; Clade; Genus; Comparative genomics; Phylum; Bacteria; Microbiology; Genomics; Genetics; Evolutionary biology; Gene; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001042734,0.0004702662,0.0002729667,0.0004334191,0.0002982034,0.0005722337,0.0001987157,0.0001812112,0.001545256],"category_scores_gemma":[0.0001797635,0.0001658167,0.0002443087,0.0004345044,0.0003356289,0.0003022386,0.0006597234,0.0003048661,0.0004417927],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000130667,"about_ca_system_score_gemma":0.0001480056,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001418112,"about_ca_topic_score_gemma":0.001479318,"domain_scores_codex":[0.9997918,0.00002009696,0.00001642474,0.00006907913,0.00004660992,0.00005594434],"domain_scores_gemma":[0.9997813,0.00001796455,0.000101211,0.00002390248,0.00003656561,0.00003908044],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002689094,0.00004140587,0.08564115,0.000218205,0.00005993185,0.0001635122,0.0001762145,0.00006997321,0.9062863,0.0001411912,0.0001801592,0.006753039],"study_design_scores_gemma":[0.000006789952,0.000338489,0.8846591,0.00004808394,0.00006922833,0.0009449933,0.000504642,0.0002461155,0.1088533,0.0001533011,0.004160432,0.00001560247],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954785,0.000977993,0.001138183,0.00003842877,0.00001084281,0.00001749777,0.0008252793,0.00003888761,0.001474453],"genre_scores_gemma":[0.9958969,0.000547385,0.001473383,0.00005713644,0.000009043643,0.00002015887,0.001153324,0.00001574554,0.0008269769],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001545256,"threshold_uncertainty_score":0.005169392,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0155603963987284,"score_gpt":0.2053561661895296,"score_spread":0.1897957697908013,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}