{"id":"W3093940905","doi":"10.1128/jvi.01580-20","title":"Country Level Diversity of the HIV-1 Pandemic between 1990 and 2015","year":2020,"lang":"en","type":"review","venue":"Journal of Virology","topic":"HIV/AIDS Research and Interventions","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Instituto Nacional do Câncer, Ministério da Saúde; Medical Research Council; School of Medicine, Vanderbilt University; Centers for Disease Control and Prevention; Robert Koch Institut; University of North Carolina at Chapel Hill; Fundação Oswaldo Cruz; Universiti Malaya; Mahidol University; Karolinska Institutet; KU Leuven; Universidad Nacional Autonoma de Honduras; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology; Stichting HIV Monitoring; University College London; World Health Organization; Seoul National University; Emory University; Universidade Federal do Rio de Janeiro; Université de Bordeaux; Faculty of Medicine Siriraj Hospital, Mahidol University; School of Medicine, Emory University; School of Medicine, New York University; Universiteit van Amsterdam; London School of Hygiene and Tropical Medicine; Los Alamos National Laboratory; University of Washington; Chinese Center for Disease Control and Prevention; York University; University of Pennsylvania; Université de Montpellier; Vanderbilt University","keywords":"Pandemic; Biology; China; Human immunodeficiency virus (HIV); Diversity (politics); Virology; Central asia; Coronavirus disease 2019 (COVID-19); Geography; Infectious disease (medical specialty); Disease; Political science; Medicine","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050548,0.000127898,0.001404773,0.0001511263,0.00006778698,0.000004330498,0.0002994656,0.0002280944,0.0001645033],"category_scores_gemma":[0.0004275244,0.00007098964,0.0005566163,0.0001413543,0.0002346823,0.00003982299,0.000404001,0.001118146,0.00002257796],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000702946,"about_ca_system_score_gemma":0.000369825,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002139655,"about_ca_topic_score_gemma":0.000007118942,"domain_scores_codex":[0.9985597,0.0002914875,0.0006010068,0.0001013329,0.000291241,0.0001552997],"domain_scores_gemma":[0.9986786,0.0002177809,0.0006527606,0.0001496715,0.0001172023,0.0001839712],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001209908,0.0001194667,0.02433831,0.0078985,0.00209864,0.0001625958,0.0001387766,6.386179e-8,0.00002651979,0.00003191829,0.2202945,0.7447697],"study_design_scores_gemma":[0.0005549717,0.001482376,0.00485271,0.003170859,0.00169015,0.0008154961,0.00001377694,0.000001602407,5.89486e-7,0.00003698727,0.9873319,0.00004862505],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0008184789,0.9969628,0.0001115767,0.001076721,0.0000764558,0.0001880714,0.0003431473,0.000002359209,0.0004204122],"genre_scores_gemma":[0.0008800253,0.9973335,0.00004210489,0.00006688449,0.0003811607,7.791406e-7,0.00001454206,0.00001012347,0.001270921],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.7670373,"threshold_uncertainty_score":0.4857848,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1421775013720541,"score_gpt":0.4118664474146522,"score_spread":0.2696889460425982,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}