{"id":"W3094198797","doi":"10.3389/fonc.2020.574552","title":"Isobaric Tags for Relative and Absolute Quantitation in Proteomic Analysis of Potential Biomarkers in Invasive Cancer, Ductal Carcinoma In Situ, and Mammary Fibroadenoma","year":2020,"lang":"en","type":"article","venue":"Frontiers in Oncology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Fibroadenoma; Ductal carcinoma; Breast cancer; Breast Fibroadenoma; Proteomics; Medicine; Malignancy; Pathology; Cancer; Oncology; Cancer research; Biology; Internal medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001147782,0.000121765,0.0004415273,0.0004304882,0.00002034673,0.000006104388,0.0001168796,0.0002129813,0.00000464082],"category_scores_gemma":[0.0000852717,0.0001448846,0.00004307395,0.0007090911,0.0001122143,0.0001516783,0.00007761442,0.0002033309,6.162721e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003331951,"about_ca_system_score_gemma":0.0001347265,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006258848,"about_ca_topic_score_gemma":0.001757812,"domain_scores_codex":[0.9989249,0.00003947048,0.0004213282,0.0003781435,0.00004851755,0.0001876958],"domain_scores_gemma":[0.9995472,0.00007849818,0.000205383,0.0001005212,0.00002569579,0.00004266689],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001235031,0.000148742,0.7451585,0.0003230231,0.0002776082,0.0000604892,0.004314221,0.001432163,0.2398007,0.0007689988,0.0002934144,0.006187107],"study_design_scores_gemma":[0.01131061,0.0006674599,0.6984678,0.0002039779,0.0004252943,0.00001261039,0.00465697,0.1885795,0.06992447,0.02459237,0.0002871864,0.0008717746],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9788721,0.00108153,0.01782186,0.001308728,0.0000231897,0.0006695802,0.00006678771,0.00001034661,0.0001458594],"genre_scores_gemma":[0.9199979,0.0005791482,0.0787194,0.00004754077,0.00001161311,0.000570015,0.00005571513,0.00001081468,0.000007871541],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1871473,"threshold_uncertainty_score":0.5908222,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01517553534777564,"score_gpt":0.28889880190839,"score_spread":0.2737232665606143,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}