{"id":"W3094534509","doi":"10.1111/mmi.14632","title":"The contribution of extrachromosomal DNA to genome plasticity in malaria parasites","year":2020,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Malaria Research and Control","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institutes of Health; Danone Institute of Canada; National Institute of Allergy and Infectious Diseases; Cornell University","keywords":"Biology; Extrachromosomal DNA; Genome; Genetics; Plasmodium falciparum; Gene; Malaria; Drug resistance; Evolutionary biology; Computational biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001372175,0.00009528951,0.0002679297,0.00004355371,0.00003463498,0.000007670405,0.0001389637,0.00009779711,0.00008559842],"category_scores_gemma":[0.0007146133,0.00006858703,0.00006875679,0.0001753634,0.00009264341,0.00001101015,0.0000708736,0.0001920537,0.00005699858],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003329937,"about_ca_system_score_gemma":0.0000846402,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001916474,"about_ca_topic_score_gemma":0.00002733493,"domain_scores_codex":[0.99901,0.0001502465,0.0002384324,0.0002078019,0.00005688706,0.0003365893],"domain_scores_gemma":[0.9994828,0.0001082978,0.0000435341,0.0001283981,0.0000980531,0.0001388799],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0009790064,0.0000453666,0.001921031,0.00001167003,0.00005282357,0.0001349082,0.00004538578,0.00002381521,0.9921942,0.004366115,0.00006432024,0.0001613379],"study_design_scores_gemma":[0.004371433,0.001835426,0.1006005,0.00002845796,0.00005865054,0.0001180869,0.00004105668,0.000376607,0.8778734,0.000109686,0.01441302,0.000173718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9722208,0.0004338991,0.006585591,0.01989764,0.00002564488,0.0006435722,0.00003228083,0.00001385342,0.0001466859],"genre_scores_gemma":[0.9983074,0.000008805234,0.000158814,0.001381748,0.0000376373,0.00002754673,0.00005249599,0.00000799782,0.00001756184],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1143209,"threshold_uncertainty_score":0.2796898,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008248550827324104,"score_gpt":0.2501097905110391,"score_spread":0.241861239683715,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}