{"id":"W3095288097","doi":"10.1182/blood.2020007193","title":"Impact of MYC and BCL2 structural variants in tumors of DLBCL morphology and mechanisms of false-negative MYC IHC","year":2020,"lang":"en","type":"article","venue":"Blood","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Genome British Columbia; Simon Fraser University; BC Cancer Agency; University of British Columbia; Spinal Cord Injury BC","funders":"Terry Fox Research Institute; Genome British Columbia; Michael Smith Health Research BC; BC Cancer Foundation; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Genome Canada","keywords":"BCL6; Biology; Copy-number variation; Gene duplication; Immunohistochemistry; Fluorescence in situ hybridization; Lymphoma; Cancer research; Gene dosage; Gene rearrangement; Genetics; Gene; Molecular biology; Gene expression; B cell; Antibody; Chromosome; Immunology; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003765975,0.0005387145,0.000471383,0.002038926,0.0004109492,0.001204573,0.0006126527,0.0004967601,0.0007278732],"category_scores_gemma":[0.0075379,0.0003880504,0.0003231292,0.0006594197,0.001053448,0.0006481539,0.0008109787,0.0003130716,0.0001931806],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005028833,"about_ca_system_score_gemma":0.000188188,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001017982,"about_ca_topic_score_gemma":0.00149296,"domain_scores_codex":[0.9968178,0.0007590396,0.000432701,0.00071251,0.0008323788,0.0004455314],"domain_scores_gemma":[0.9942854,0.002877536,0.001298419,0.0006463465,0.0006056423,0.0002865608],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005004697,0.00002627535,0.9712705,0.00003289852,0.0000457136,0.003404655,0.0002404846,0.0002126637,0.01764827,0.00007721342,0.00004032406,0.006500463],"study_design_scores_gemma":[0.00001555251,0.0003481565,0.9427524,0.00001923511,0.0001728115,0.03070708,0.00045757,0.003017977,0.02161659,0.0002192487,0.0006525053,0.0000210258],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997462,0.0005961774,0.001255038,0.00001910684,0.000004562941,0.00001455188,0.00004127091,0.00002785844,0.0005794035],"genre_scores_gemma":[0.9994503,0.00006798578,0.0003458966,0.00001101085,0.000003156066,0.000004678157,0.00005101109,0.000008539587,0.00005751117],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003765975,"threshold_uncertainty_score":0.01991659,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01423140745118181,"score_gpt":0.2672103820898608,"score_spread":0.252978974638679,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}