{"id":"W3096084910","doi":"10.3390/biomedicines8110469","title":"Dietary Vitamin B6 Deficiency Impairs Gut Microbiota and Host and Microbial Metabolites in Rats","year":2020,"lang":"en","type":"article","venue":"Biomedicines","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Children's Hospital Research Institute; Alberta Innovates","keywords":"Gut flora; Lachnospiraceae; Biology; Bacteroides; Metabolomics; Butyrate; Cecum; Metabolite; Vitamin; Metabolism; Dysbiosis; Internal medicine; Endocrinology; Firmicutes; Microbiology; Biochemistry; Bacteria; Medicine; Fermentation","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001215319,0.0001880582,0.0002468019,0.00008230455,0.0000646785,0.00001957616,0.0001040438,0.0001350229,0.000009359147],"category_scores_gemma":[0.00004959029,0.0001577212,0.00003271702,0.0001855245,0.0002455577,0.000005179976,0.0001365119,0.00008621932,0.000004738531],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006098411,"about_ca_system_score_gemma":0.00006170366,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001234058,"about_ca_topic_score_gemma":0.00009140987,"domain_scores_codex":[0.9989403,0.00004188532,0.0002437683,0.0004306646,0.00004954042,0.000293863],"domain_scores_gemma":[0.9995962,0.00001244265,0.00005534457,0.0001378518,0.00003084436,0.000167364],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000582657,0.00003433292,0.0154093,0.0001263457,0.00001122459,0.000007432236,0.0003385896,5.977904e-8,0.9784681,0.00000529581,0.004513743,0.00102728],"study_design_scores_gemma":[0.002719803,0.001141623,0.6168678,0.0001024216,0.00007222637,0.0001494778,0.0007650946,0.00002276569,0.31248,0.00001099168,0.06506905,0.0005986516],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9801025,0.01544286,0.00001093065,0.003979543,0.0001256001,0.0002048227,0.00006266489,0.00001181336,0.0000592118],"genre_scores_gemma":[0.994455,0.002341739,0.0004882942,0.002240972,0.0002860544,0.000004087941,0.000100033,0.00001692621,0.00006688991],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6659881,"threshold_uncertainty_score":0.6431684,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0118198858354696,"score_gpt":0.2476319498762515,"score_spread":0.2358120640407819,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}