{"id":"W3097719876","doi":"10.3390/microorganisms8111666","title":"Comparative Genomics Analysis of Vibrio anguillarum Isolated from Lumpfish (Cyclopterus lumpus) in Newfoundland Reveal Novel Chromosomal Organizations","year":2020,"lang":"en","type":"article","venue":"Microorganisms","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"Government of Newfoundland and Labrador; Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada; Ocean Frontier Institute","keywords":"Vibrio anguillarum; Biology; Virulence; Salmo; Microbiology; Zoology; Plasmid; Fishery; Genome; Vibrio; Genetics; Gene; Fish <Actinopterygii>; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003683545,0.0001889711,0.000170959,0.0007281704,0.0002765534,0.0002179208,0.000120752,0.0001269827,0.0005914045],"category_scores_gemma":[0.0001193747,0.0001013081,0.0003198854,0.0005736027,0.000180723,0.00009472998,0.000266532,0.0002089855,0.0001707495],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006009821,"about_ca_system_score_gemma":0.0003845153,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.05832084,"about_ca_topic_score_gemma":0.09603903,"domain_scores_codex":[0.9999241,0.000002183158,0.000004993905,0.00003011015,0.00001579298,0.00002293967],"domain_scores_gemma":[0.9998789,0.00001391703,0.00004698209,0.000006455151,0.00002120765,0.00003250846],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001943486,0.00003184807,0.04771488,0.00006161752,0.00002392555,0.0002096444,0.0003944871,0.0001008715,0.9471428,0.00003354492,0.00006719385,0.004024799],"study_design_scores_gemma":[0.000002143867,0.0001000329,0.9925312,0.000003893747,0.00001883546,0.0002161055,0.0002758698,0.00009302108,0.006181221,0.000005793698,0.0005687323,0.000003100862],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985614,0.000137264,0.0001155723,0.00001400966,0.000002017705,0.000005192316,0.000821306,0.000005022391,0.0003381486],"genre_scores_gemma":[0.9943778,0.0001519809,0.0004480158,0.00003496504,0.000002417597,0.000009447509,0.003523282,0.000004834334,0.001447293],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9416792,"threshold_uncertainty_score":0.1159627,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01538239485913838,"score_gpt":0.2546301855020278,"score_spread":0.2392477906428894,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}