{"id":"W3099396523","doi":"10.1007/s42770-020-00391-1","title":"The frequency of high-risk human papillomavirus types, HPV16 lineages, and their relationship with p16INK4a and NF-κB expression in head and neck squamous cell carcinomas in Southwestern Iran","year":2020,"lang":"en","type":"article","venue":"Brazilian Journal of Microbiology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"Vice-Chancellor for Research, Shiraz University of Medical Sciences; Shiraz University; Shiraz University of Medical Sciences","keywords":"Immunohistochemistry; Lineage (genetic); Human papillomavirus; Biology; Head and neck cancer; HPV infection; Phylogenetic tree; Head and neck squamous-cell carcinoma; Cancer; Cancer research; Head and neck; Oncology; Pathology; Gene; Cervical cancer; Internal medicine; Medicine; Immunology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003617081,0.0001294618,0.0003988688,0.0001131474,0.00008088755,0.00001357885,0.00009607457,0.0001224283,0.00004192903],"category_scores_gemma":[0.0001059115,0.0000731755,0.00003040418,0.0001368032,0.000292231,0.00005007979,0.00005909149,0.0006280236,7.45234e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002601978,"about_ca_system_score_gemma":0.00008223194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003297798,"about_ca_topic_score_gemma":0.002248714,"domain_scores_codex":[0.9988904,0.0002265726,0.0004390329,0.0001847555,0.00005877492,0.0002004401],"domain_scores_gemma":[0.9991688,0.0002905794,0.0001963515,0.0001168089,0.00007727991,0.0001501583],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009698583,0.00004714774,0.8781883,0.0001195682,0.00001174763,0.00005967531,0.001829735,0.000002950657,0.1156526,0.00001686794,0.00004842307,0.003053125],"study_design_scores_gemma":[0.005841144,0.001873882,0.9818954,0.00009907393,0.00002578126,0.0002170077,0.0005597728,0.000006635465,0.008875048,0.000248193,0.0002722753,0.00008573481],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9855887,0.01301201,0.00001116046,0.001016124,0.00002085998,0.0001889646,0.00002555878,0.000003030318,0.000133561],"genre_scores_gemma":[0.999046,0.0005153566,0.0001962738,0.0001186009,0.00007202616,0.000001707962,0.000007351967,0.0000134659,0.00002918195],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1067776,"threshold_uncertainty_score":0.298401,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02769060613609468,"score_gpt":0.27453888063173,"score_spread":0.2468482744956353,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}