{"id":"W3101678791","doi":"10.1101/276188","title":"Type I-F CRISPR-Cas distribution and array dynamics in <i>Legionella pneumophila</i>","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"CRISPR; Legionella pneumophila; Biology; Plasmid; Computational biology; Genetics; DNA; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001125871,0.0001165093,0.000123587,0.0002405598,0.0001802534,0.0005520123,0.0002010764,0.000256703,0.0009882979],"category_scores_gemma":[0.0002689284,0.0001294944,0.0001159844,0.000140689,0.0002144127,0.0003066685,0.0002212454,0.00035265,0.0003732615],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005330559,"about_ca_system_score_gemma":0.0001717911,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002066638,"about_ca_topic_score_gemma":0.001633847,"domain_scores_codex":[0.9998984,0.000009603495,0.000006792372,0.00003667362,0.00002248487,0.00002597067],"domain_scores_gemma":[0.9997522,0.0000411436,0.00008435288,0.00002391582,0.00003115424,0.00006722844],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001027535,0.00003001631,0.007735548,0.00001717371,0.000005670768,0.00007468967,0.00006105866,0.0006362335,0.988871,0.0003546805,0.0001781148,0.001932958],"study_design_scores_gemma":[0.00001674062,0.0001872419,0.1241964,0.0000103509,0.00001303091,0.0002960011,0.0002999876,0.01885292,0.8529998,0.0006369339,0.002451181,0.00003942859],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969338,0.0001452674,0.001766987,0.00004776848,0.000005957821,0.000002685365,0.0002781221,0.00008482745,0.0007346277],"genre_scores_gemma":[0.9984816,0.00004053226,0.0005616397,0.0000138088,0.000001538282,0.000003294977,0.0001526538,0.00001558363,0.0007294092],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002066638,"threshold_uncertainty_score":0.004109144,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007019146395522442,"score_gpt":0.2411705971772269,"score_spread":0.2341514507817045,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}