{"id":"W3102210885","doi":"10.1089/mdr.2019.0433","title":"Characterization of <i>bla</i> <sub>KPC-2</sub> -Harboring <i>Klebsiella pneumoniae</i> Isolates and Mobile Genetic Elements from Outbreaks in a Hospital in Ecuador","year":2020,"lang":"en","type":"article","venue":"Microbial Drug Resistance","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"Klebsiella pneumoniae; Plasmid; Outbreak; Microbiology; clone (Java method); Gene; Biology; Mobile genetic elements; Escherichia coli; Virology; Medicine; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00009814166,0.0002548197,0.0003453172,0.0000493632,0.0000343041,0.0000398826,0.000249193,0.0001440297,0.000005892659],"category_scores_gemma":[0.00004307661,0.0002943203,0.00005997807,0.0001989139,0.0001072766,0.00001665451,0.0001616857,0.0001374951,0.000004740752],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003227293,"about_ca_system_score_gemma":0.00005575686,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004266202,"about_ca_topic_score_gemma":0.0004235657,"domain_scores_codex":[0.9982347,0.00008441607,0.0006197934,0.0006338643,0.00009292786,0.0003342607],"domain_scores_gemma":[0.9993208,0.00001663071,0.0002540518,0.0002758641,0.00004907189,0.00008358007],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002421844,0.00009593892,0.05400952,0.00009430161,0.00001826688,0.0000131833,0.0004461723,0.000007904406,0.9445274,8.435406e-7,0.0001121074,0.0004321233],"study_design_scores_gemma":[0.0009462438,0.00007911352,0.06984346,0.0001803757,0.00001194807,7.32048e-7,0.00007924036,0.00003309967,0.9269174,0.00000900883,0.001601392,0.0002979809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980255,0.0008447446,0.00008364535,0.0001860171,0.0001127622,0.0004840649,0.0002170773,0.00001138815,0.0000347821],"genre_scores_gemma":[0.997565,0.001165045,0.0006734814,0.0001791478,0.000120044,0.00002020477,0.0001862472,0.00004307316,0.00004779467],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01761004,"threshold_uncertainty_score":0.9999509,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002850553706452252,"score_gpt":0.1855443638613083,"score_spread":0.182693810154856,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}