{"id":"W3102250328","doi":"10.3390/tropicalmed5040173","title":"Microbiome Composition and Borrelia Detection in Ixodes scapularis Ticks at the Northwestern Edge of Their Range","year":2020,"lang":"en","type":"article","venue":"Tropical Medicine and Infectious Disease","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates - Technology Futures; Alberta Conservation Association","keywords":"Ixodes scapularis; Borrelia burgdorferi; Borrelia; Lyme disease; Tick; Biology; Ixodes; Ixodidae; Microbiome; Borrelia garinii; Microbiology; Tick-borne disease; Zoology; Ecology; Virology; Immunology; Antibody","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005689859,0.0001960521,0.0003350781,0.00009599617,0.0001625754,0.000009171242,0.00006743241,0.0001098361,0.0001696865],"category_scores_gemma":[0.0001095999,0.000127674,0.00006430348,0.0001958819,0.0006600709,0.00007284301,0.00009234017,0.0002180676,0.00002134145],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004087838,"about_ca_system_score_gemma":0.00002356329,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005242887,"about_ca_topic_score_gemma":0.0005299234,"domain_scores_codex":[0.9989215,0.0002180349,0.0003094102,0.0003000754,0.0000414012,0.0002096031],"domain_scores_gemma":[0.9993724,0.0001919106,0.0001015618,0.0001627653,0.00005225216,0.0001191377],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007971184,0.0002303984,0.827295,0.0001832428,0.0001174968,0.00001449618,0.001150022,0.000004835904,0.1632527,0.00009462746,0.0004763505,0.006383656],"study_design_scores_gemma":[0.003526209,0.0008146326,0.9870051,0.00009674999,0.0002433714,0.00006545106,0.0001709012,0.000053916,0.005895761,0.0001297243,0.00181865,0.0001795601],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9899621,0.007678682,0.0001826665,0.001419825,0.0001959809,0.0003605937,0.00004889588,0.00006439972,0.00008683623],"genre_scores_gemma":[0.9982163,0.0004364819,8.977003e-7,0.001141686,0.00009280479,0.0000302409,0.00005186179,0.00001462909,0.00001510234],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.15971,"threshold_uncertainty_score":0.5206395,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01137194706759498,"score_gpt":0.2293522254519552,"score_spread":0.2179802783843603,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}