{"id":"W3103201516","doi":"10.1128/mra.00960-20","title":"Complete Genome Sequence of a Canadian Klebsiella michiganensis Strain, Obtained Using Oxford Nanopore Technologies Sequencing","year":2020,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"Canadian Food Inspection Agency","keywords":"Whole genome sequencing; Strain (injury); Opportunistic pathogen; Microbiology; Nanopore sequencing; Klebsiella; Biology; Genome; Pathogen; Clavibacter michiganensis; Sequence (biology); Genetics; Gene; Virulence; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003233909,0.00140486,0.001024132,0.002376891,0.002321474,0.0008872587,0.0009299749,0.001000301,0.005438894],"category_scores_gemma":[0.0008630591,0.0004223313,0.0006544655,0.005788484,0.0004958818,0.0005434694,0.0006510684,0.001403174,0.003026841],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.003776427,"about_ca_system_score_gemma":0.0160261,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.6228926,"about_ca_topic_score_gemma":0.7333674,"domain_scores_codex":[0.9994751,0.00001359936,0.00002595747,0.00009879494,0.0002984903,0.00008812254],"domain_scores_gemma":[0.9993617,0.00004666071,0.00007335133,0.0000285876,0.0003725234,0.0001172013],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001144793,0.0002036408,0.008305561,0.00260444,0.0001445717,0.001051634,0.0008458456,0.001247099,0.8744302,0.001047237,0.06332195,0.04565306],"study_design_scores_gemma":[0.000230317,0.0004637403,0.2816169,0.0004518518,0.0006220729,0.001986005,0.001299352,0.002512619,0.1146724,0.000832881,0.5949507,0.0003612168],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.1699274,0.00651828,0.01415883,0.00160432,0.0004010136,0.0007480853,0.7859175,0.001416672,0.01930789],"genre_scores_gemma":[0.1013217,0.005782242,0.03725954,0.0004658437,0.00006602401,0.0003094403,0.8414005,0.0003967879,0.01299789],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.3771074,"threshold_uncertainty_score":0.7586565,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04946996193849734,"score_gpt":0.2341740800703158,"score_spread":0.1847041181318185,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}