{"id":"W3103438531","doi":"10.1007/978-1-0716-0880-7_21","title":"Biotin-Based Proximity Labeling of Protein Complexes in Planta","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto; Agriculture and Agri-Food Canada","funders":"","keywords":"Biotinylation; Proteome; Biotin; Biochemistry; Protein Data Bank (RCSB PDB); Protein–protein interaction; Proteomics; Chemistry; Computational biology; Yeast; Interactome; Biology; Cell biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002835279,0.0004098735,0.0005656834,0.0003927454,0.0006595445,0.0009033267,0.00106572,0.0006851272,0.002448469],"category_scores_gemma":[0.0002699232,0.0004863669,0.0004146136,0.0005853248,0.0004354442,0.001083508,0.000937679,0.001884231,0.003112736],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009407134,"about_ca_system_score_gemma":0.000248817,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001073251,"about_ca_topic_score_gemma":0.001768248,"domain_scores_codex":[0.9997416,0.0000400444,0.00001074177,0.00009342622,0.00008312774,0.00003099247],"domain_scores_gemma":[0.9998941,0.00005004925,0.00001030089,0.00001816578,0.00001306585,0.00001430141],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000070517,0.00002438444,0.00002836932,0.0002191456,0.000007487759,0.00006840166,0.00008016345,0.0002896706,0.9841354,0.00405909,0.0005038289,0.01051352],"study_design_scores_gemma":[0.000006086779,0.00004578893,0.0003513891,0.00002417318,0.00001238455,0.0002692526,0.0000457599,0.00187315,0.9572439,0.001838131,0.03827711,0.00001277778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.2869591,0.07193522,0.5626032,0.00168464,0.0008160989,0.0003109703,0.001364908,0.002501222,0.07182468],"genre_scores_gemma":[0.5952903,0.03513602,0.2160006,0.0006034408,0.0001434022,0.0004003706,0.00246138,0.001115289,0.1488492],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.002448469,"threshold_uncertainty_score":0.00819093,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0295852605402916,"score_gpt":0.3419476521054632,"score_spread":0.3123623915651716,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}