{"id":"W3104856934","doi":"10.3390/microorganisms8111829","title":"Behind Taxonomic Variability: The Functional Redundancy in the Tick Microbiome","year":2020,"lang":"en","type":"article","venue":"Microorganisms","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Ixodes scapularis; Microbiome; Tick; Zoology; Ixodidae; Borrelia burgdorferi; Borrelia; Metagenomics; Acari; Microbiology; Ecology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004428111,0.0001212309,0.00012072,0.000004074352,0.000279233,0.0001769042,0.0004635842,0.00007036387,0.001530166],"category_scores_gemma":[0.00004444971,0.0000325367,0.00007120318,0.0002294927,0.0001155216,0.00008037957,0.00007433075,0.0001598067,0.0002236247],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002077944,"about_ca_system_score_gemma":0.00001389238,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002136563,"about_ca_topic_score_gemma":0.0002264098,"domain_scores_codex":[0.9990314,0.0001812062,0.0002205925,0.0002543663,0.00009562897,0.0002168579],"domain_scores_gemma":[0.9996262,0.0001834833,0.00006307336,0.00006780938,0.00002431848,0.00003511637],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001660487,0.00003951249,0.002121467,0.000002034033,0.000004980607,0.000001358826,0.000505419,5.776276e-7,0.9928153,0.0002289822,0.002908978,0.00135474],"study_design_scores_gemma":[0.0002570988,0.000298502,0.5955254,0.00001252359,0.00002284517,0.00003507974,0.001347111,0.000007829385,0.1794192,0.001067765,0.2216782,0.000328527],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9692094,0.00004568717,0.000002832496,0.0298023,0.0001843825,0.0002340514,0.00004082602,0.00002257689,0.0004579551],"genre_scores_gemma":[0.991855,0.000005858887,0.0000382884,0.007456709,0.0005506717,0.00001285581,0.00003433257,9.314343e-7,0.00004535509],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8133962,"threshold_uncertainty_score":0.9993826,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03115854000505166,"score_gpt":0.1741816749958276,"score_spread":0.1430231349907759,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}