{"id":"W3106069390","doi":"10.1139/gen-2020-0062","title":"Identification of lncRNAs in response to infection by <i>Plasmodiophora brassicae</i> in <i>Brassica napus</i> and development of lncRNA-based SSR markers","year":2020,"lang":"en","type":"article","venue":"Genome","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Brassica; Clubroot; Identification (biology); Genetics; Alternaria brassicae; Computational biology; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007024744,0.0002587149,0.0001758031,0.0003542796,0.0001791311,0.0002433268,0.0001252937,0.0001853256,0.000793404],"category_scores_gemma":[0.0001153514,0.0001278423,0.0002698818,0.000292507,0.0001525759,0.0001439452,0.0001977295,0.0002727011,0.000293367],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002627895,"about_ca_system_score_gemma":0.0001606159,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001707813,"about_ca_topic_score_gemma":0.003564471,"domain_scores_codex":[0.9999148,0.000004245636,0.000005189416,0.0000467022,0.00001629093,0.00001270883],"domain_scores_gemma":[0.999868,0.00002313168,0.00005869389,0.000009564515,0.0000157978,0.00002471646],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005383719,0.000003547052,0.00117906,0.0000272221,0.000004196134,0.0000373884,0.00003436765,0.00003264304,0.9976937,0.00002473436,0.00002322845,0.0008860448],"study_design_scores_gemma":[0.00003654838,0.0003698853,0.4297894,0.00004040185,0.0001403198,0.0008973178,0.0003449677,0.00232897,0.5533013,0.0002269174,0.01248098,0.00004301223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913481,0.001146944,0.003248721,0.00006897411,0.00001816307,0.00002127469,0.002928751,0.0001420795,0.001076953],"genre_scores_gemma":[0.9837847,0.0008243177,0.004507936,0.0001407184,0.00001491828,0.00006071438,0.007329288,0.00005582399,0.003281608],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001707813,"threshold_uncertainty_score":0.003395677,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01127581078159866,"score_gpt":0.2023564558473566,"score_spread":0.1910806450657579,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}