{"id":"W3106940356","doi":"10.1093/nar/gkaa1101","title":"MoonProt 3.0: an update of the moonlighting proteins database","year":2020,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"University of Illinois at Chicago","keywords":"Biology; Organism; Database; Protein Data Bank; Computational biology; Transmembrane protein; UniProt; Protein structure; Genetics; Biochemistry; Gene; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009454691,0.0001195485,0.0001371957,0.00003202891,0.0002225826,0.00003604662,0.0009163762,0.0001256378,0.0001746145],"category_scores_gemma":[0.0005584526,0.00008519151,0.00007816473,0.0002853601,0.0001839312,0.00001023132,0.0006443923,0.0002606998,0.00005143462],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008924003,"about_ca_system_score_gemma":0.0001363028,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003153613,"about_ca_topic_score_gemma":0.000007987584,"domain_scores_codex":[0.9979944,0.0004691703,0.0002107166,0.0004201671,0.0005403302,0.0003651735],"domain_scores_gemma":[0.9987684,0.00001576665,0.00006487122,0.0007945123,0.0001865042,0.000169928],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001125201,0.00004706525,0.0005333138,0.00004500791,0.00001762632,0.00000231901,0.0001176853,0.000004729176,0.991915,0.0006586844,0.000713114,0.005832894],"study_design_scores_gemma":[0.0002147785,0.0003715027,0.0002954513,0.00002363012,0.000004261512,0.000002730039,0.0001686208,0.0001710745,0.9698646,0.0002286767,0.02854959,0.0001050894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931169,0.0001950413,0.00137253,0.002579243,0.0000417637,0.0008365316,0.00006035051,0.00001597683,0.001781681],"genre_scores_gemma":[0.9951907,0.00004970816,0.003807743,0.0003147115,0.00028803,0.00007211725,0.00003164154,0.00003466167,0.0002106382],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02783648,"threshold_uncertainty_score":0.3474009,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06123313075153628,"score_gpt":0.3291640229027196,"score_spread":0.2679308921511833,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}