{"id":"W3107467591","doi":"10.1101/2020.11.26.400531","title":"Heritability of DNA methylation in threespine stickleback ( <i>Gasterosteus aculeatus</i> )","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Bone and Joint Health Institute; University of Calgary; McGill University","funders":"Alberta Innovates; China Scholarship Council; Natural Sciences and Engineering Research Council of Canada; Fudan University","keywords":"Biology; DNA methylation; Epigenetics; Heritability; Gasterosteus; Genetic architecture; Genetics; Stickleback; Methylation; Epigenomics; Population; Quantitative trait locus; Genetic variation; Ecotype; CpG site; Differentially methylated regions; Evolutionary biology; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001922191,0.0001618846,0.0001481597,0.0006858534,0.0001738224,0.0002046072,0.0001670438,0.0001772876,0.0009401285],"category_scores_gemma":[0.0002127181,0.0001186754,0.0001543031,0.0002231705,0.0002190255,0.00007328419,0.0002509228,0.0002230473,0.0001142148],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002894427,"about_ca_system_score_gemma":0.00009910773,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006634208,"about_ca_topic_score_gemma":0.01059119,"domain_scores_codex":[0.9998798,0.00001500291,0.000008439273,0.00006107334,0.00002225118,0.00001328714],"domain_scores_gemma":[0.9997483,0.00005402203,0.00009752924,0.00002801504,0.00002996525,0.00004230996],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002825717,0.00003358704,0.1737758,0.0000436901,0.000129919,0.00008102017,0.0003126248,0.0002983618,0.8193599,0.0001161805,0.00008944063,0.005476994],"study_design_scores_gemma":[0.000003138095,0.00006729402,0.9912093,0.000002807921,0.00002515268,0.00006178085,0.00005517888,0.0003400908,0.008043946,0.00002705693,0.0001591024,0.000005239162],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991434,0.00005490654,0.0003707576,0.000006539459,0.00000138991,0.000002805474,0.0002679081,0.00001397491,0.0001382413],"genre_scores_gemma":[0.9993163,0.0000175703,0.0002193493,0.000008235337,0.000001094113,0.000004935379,0.0002319899,0.000006121606,0.0001944529],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006634208,"threshold_uncertainty_score":0.01319116,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01690143772344126,"score_gpt":0.2397481305365952,"score_spread":0.2228466928131539,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}