{"id":"W3108229839","doi":"10.1128/jvi.01842-19","title":"Proteomics of Herpes Simplex Virus 1 Nuclear Capsids","year":2020,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Research in Immunology and Cancer; Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"Canadian Institutes of Health Research; Canada Foundation for Innovation; Government of Canada; Genome Canada","keywords":"Biology; Capsid; Herpes simplex virus; Virology; Budding; Proteomics; Viral tegument; Computational biology; Viral replication; Virus; Cell biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000267301,0.0003035916,0.000192275,0.0004914752,0.0003984253,0.0007168914,0.0001635784,0.0002503643,0.001354126],"category_scores_gemma":[0.0002853764,0.0001370258,0.0001894313,0.0003060957,0.0001768942,0.0003145123,0.0002298442,0.000317313,0.0004733221],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005043616,"about_ca_system_score_gemma":0.0004067177,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00102234,"about_ca_topic_score_gemma":0.001803628,"domain_scores_codex":[0.9998512,0.00002194449,0.00001012982,0.00003450651,0.00005308386,0.00002909635],"domain_scores_gemma":[0.9999187,0.00001885382,0.00001196602,0.000006598096,0.0000217632,0.00002209846],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006453036,0.000021697,0.000777836,0.00009268527,0.00001831311,0.00006250491,0.00004494123,0.00006483583,0.9940155,0.000395038,0.0002384603,0.004203556],"study_design_scores_gemma":[0.00002379534,0.0002435177,0.0590676,0.00007243428,0.00005571606,0.001788791,0.0004766963,0.005448154,0.9100436,0.001083166,0.0216662,0.00003036559],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9772231,0.008501323,0.007623801,0.0003677882,0.0001815033,0.00005073533,0.0006638768,0.0001130216,0.005275001],"genre_scores_gemma":[0.9786536,0.003888655,0.009488574,0.000257513,0.00004922409,0.0000244834,0.001245781,0.00004910552,0.006343147],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001354126,"threshold_uncertainty_score":0.004530013,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02837795599650135,"score_gpt":0.2813139654470738,"score_spread":0.2529360094505724,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}