{"id":"W3108241573","doi":"10.3390/genes11121429","title":"The Genomic Impact of Selection for Virulence against Resistance in the Potato Cyst Nematode, Globodera pallida","year":2020,"lang":"en","type":"article","venue":"Genes","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Biotechnology and Biological Sciences Research Council; University of St Andrews; Wellcome Trust; Agriculture and Horticulture Development Board; International Seafood Sustainability Foundation; U.S. Department of Agriculture; Scottish Government; Rural and Environment Science and Analytical Services Division","keywords":"Globodera pallida; Biology; Virulence; Selection (genetic algorithm); Solanum tuberosum; Genetics; Potato cyst nematode; Population; Globodera rostochiensis; Nematode; Gene; Biotechnology; Botany; Solanaceae; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001333414,0.00007185221,0.00009522052,0.000003269527,0.0002345529,0.0000562768,0.0002061787,0.00001677875,0.000008560914],"category_scores_gemma":[0.0000207275,0.00002008779,0.00007056576,0.0002404891,0.00002871531,0.00004461002,0.0000330213,0.00002620856,0.000003659544],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000857431,"about_ca_system_score_gemma":0.000003918815,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002491904,"about_ca_topic_score_gemma":0.000746149,"domain_scores_codex":[0.9994668,0.00004199651,0.000154816,0.000120753,0.00008972322,0.0001259573],"domain_scores_gemma":[0.999705,0.0001243467,0.00008738589,0.0000296055,0.00003893906,0.00001472274],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003086941,0.00005247757,0.08309995,0.00006723261,0.0000730579,0.000001467343,0.001458702,0.0001739287,0.8806417,0.002257545,0.005015775,0.02684945],"study_design_scores_gemma":[0.000277441,0.0002015998,0.9361,0.00002461912,0.00001866184,7.652167e-7,0.002220577,0.0007719576,0.00277843,0.001018228,0.05637543,0.0002122602],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9948302,0.0007399507,0.00003474144,0.003775323,0.00002359504,0.0002862871,0.000021701,0.00001404623,0.0002741766],"genre_scores_gemma":[0.998729,0.0006300882,0.00002539648,0.0003985586,0.00009825887,0.00004204483,0.00001628373,6.169479e-7,0.00005973238],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8778633,"threshold_uncertainty_score":0.1804015,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02794568335897444,"score_gpt":0.2486802414715921,"score_spread":0.2207345581126177,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}