{"id":"W3108241573","doi":"10.3390/genes11121429","title":"The Genomic Impact of Selection for Virulence against Resistance in the Potato Cyst Nematode, Globodera pallida","year":2020,"lang":"en","type":"article","venue":"Genes","topic":"Nematode management and characterization studies","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Biotechnology and Biological Sciences Research Council; University of St Andrews; Wellcome Trust; Agriculture and Horticulture Development Board; International Seafood Sustainability Foundation; U.S. Department of Agriculture; Scottish Government; Rural and Environment Science and Analytical Services Division","keywords":"Globodera pallida; Biology; Virulence; Selection (genetic algorithm); Solanum tuberosum; Genetics; Potato cyst nematode; Population; Globodera rostochiensis; Nematode; Gene; Biotechnology; Botany; Solanaceae; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006995357,0.0001640061,0.0001234727,0.0002895236,0.00008893647,0.0002203633,0.00009361529,0.0001770285,0.0004193488],"category_scores_gemma":[0.0001556096,0.00008463096,0.000113416,0.000129791,0.0001511661,0.00007064836,0.0002528112,0.0002443672,0.00008053526],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000117289,"about_ca_system_score_gemma":0.00009252995,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004153231,"about_ca_topic_score_gemma":0.0008734713,"domain_scores_codex":[0.9999385,0.00000923383,0.000004715549,0.00002369659,0.00001167043,0.00001209267],"domain_scores_gemma":[0.99989,0.00003568435,0.0000357447,0.00000867654,0.000009576196,0.0000203188],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005424491,0.00001096756,0.005402518,0.00001928601,0.000006470985,0.00006818365,0.00005096868,0.00003756506,0.9931514,0.00002708979,0.000003712223,0.00116747],"study_design_scores_gemma":[0.00001276863,0.0004980825,0.8951514,0.00001440867,0.00005780037,0.0008542995,0.0002971301,0.0008996127,0.1013166,0.0001179768,0.00076934,0.00001050569],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9995084,0.00006462504,0.0001900659,0.000006764516,6.975848e-7,0.000002869761,0.00007405328,0.00000355988,0.0001489901],"genre_scores_gemma":[0.9991676,0.00006164527,0.0002840662,0.00001007199,9.313414e-7,0.000004408319,0.0002108309,0.000003117454,0.0002573864],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0004193488,"threshold_uncertainty_score":0.001402855,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02794568335897444,"score_gpt":0.2486802414715921,"score_spread":0.2207345581126177,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}