{"id":"W3108807472","doi":"10.3389/fimmu.2020.561234","title":"The Neoantigen Landscape of Mycosis Fungoides","year":2020,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Cutaneous lymphoproliferative disorders research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; National Institutes of Health; Bispebjerg Hospital; Alberta Innovates; University of Alberta; Kræftens Bekæmpelse; Canadian Dermatology Foundation","keywords":"Mycosis fungoides; Medicine; Dermatology; Immunology; Cancer research; Lymphoma","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001392472,0.00009813595,0.0003292826,0.0001062228,0.00006699905,0.000008346065,0.000217152,0.00009492768,0.0001083245],"category_scores_gemma":[0.0005483112,0.00007044307,0.00007588236,0.0003703923,0.0003148526,0.00002454256,0.00008924844,0.000232721,0.00003094372],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003995333,"about_ca_system_score_gemma":0.0001470752,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003442328,"about_ca_topic_score_gemma":0.00001336459,"domain_scores_codex":[0.9989905,0.0001086264,0.0002601491,0.0001862655,0.0001550942,0.0002993866],"domain_scores_gemma":[0.9994582,0.0001064621,0.0000562979,0.0002410908,0.00008840855,0.00004956672],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002333295,0.00009162525,0.9009495,0.00005748021,0.0003823672,0.00007381642,0.001965942,0.00001035229,0.0156127,0.000311779,0.03577349,0.04243768],"study_design_scores_gemma":[0.01535293,0.005772801,0.5218118,0.0002177231,0.0002076776,0.0007801373,0.03561252,0.01380685,0.06482214,0.00332448,0.3374293,0.000861677],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9424457,0.03421922,0.001206053,0.01426683,0.0004050707,0.0006011744,0.000008432316,0.00004060074,0.006806926],"genre_scores_gemma":[0.9947447,0.003285961,0.0009446874,0.000434755,0.00004101741,0.00002663269,0.00001108447,0.00001818408,0.0004929927],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3791377,"threshold_uncertainty_score":0.2872585,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01571063271515195,"score_gpt":0.2659174619005308,"score_spread":0.2502068291853788,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}