{"id":"W3109167454","doi":"10.1111/jbg.12525","title":"Genome‐wide association study and pathway analysis for fat deposition traits in nellore cattle raised in pasture–based systems","year":2020,"lang":"en","type":"article","venue":"Journal of Animal Breeding and Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Candidate gene; Genome-wide association study; Genetics; Gene; Single-nucleotide polymorphism; Context (archaeology); Quantitative trait locus; Computational biology; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002945974,0.0001160202,0.0002636457,0.0001051165,0.00003909066,0.00004254489,0.00007646962,0.0001170082,7.817368e-7],"category_scores_gemma":[0.0001169856,0.0001097804,0.00006558539,0.0001743601,0.00001679843,0.000004783666,0.00002273911,0.0001104733,6.895084e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000212612,"about_ca_system_score_gemma":0.0000370066,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006167545,"about_ca_topic_score_gemma":0.00003689631,"domain_scores_codex":[0.9990775,0.00006759643,0.0003790003,0.000188203,0.0001363421,0.0001513593],"domain_scores_gemma":[0.9994633,0.00006254607,0.0002303653,0.00004271631,0.0001050186,0.00009611803],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004568842,0.0001188216,0.8033943,0.00004810302,0.0001926735,0.00000229403,0.001086228,0.01171824,0.1825981,0.000005922687,0.00003278041,0.0003456568],"study_design_scores_gemma":[0.001849237,0.00396656,0.9889874,0.00001532398,0.0001588737,0.00000262476,0.001090243,0.001074841,0.002603949,0.00001771809,0.0001095184,0.0001237172],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9875956,0.001896295,0.009924305,0.0002694447,0.00004740749,0.0002340213,0.00001628322,0.000001779599,0.00001487337],"genre_scores_gemma":[0.9967259,0.00004447602,0.002834962,0.0001178062,0.0002438976,0.000005620281,0.000009555554,0.00001061381,0.000007171513],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1855931,"threshold_uncertainty_score":0.4476716,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0203586148735274,"score_gpt":0.241750390286963,"score_spread":0.2213917754134355,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}