{"id":"W3109167454","doi":"10.1111/jbg.12525","title":"Genome‐wide association study and pathway analysis for fat deposition traits in nellore cattle raised in pasture–based systems","year":2020,"lang":"en","type":"article","venue":"Journal of Animal Breeding and Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Candidate gene; Genome-wide association study; Genetics; Gene; Single-nucleotide polymorphism; Context (archaeology); Quantitative trait locus; Computational biology; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008983253,0.0003108973,0.0004494388,0.001116723,0.0005358173,0.0005617467,0.0002410737,0.000285303,0.002421426],"category_scores_gemma":[0.0007217478,0.0001486898,0.0009725384,0.001522878,0.0002155168,0.0001793196,0.0003813286,0.0003693801,0.0001521594],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002675678,"about_ca_system_score_gemma":0.0003721652,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005300339,"about_ca_topic_score_gemma":0.009627636,"domain_scores_codex":[0.9994416,0.0001721007,0.00002835069,0.0002226771,0.00004678787,0.00008849629],"domain_scores_gemma":[0.9995378,0.0001682433,0.0001251479,0.00004966205,0.00003756028,0.00008161443],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001309199,0.0001006644,0.9551135,0.000111893,0.001394819,0.0005702149,0.0003678913,0.0003810494,0.03040246,0.000172029,0.0002901795,0.009786047],"study_design_scores_gemma":[0.00001189272,0.00006991499,0.9977778,0.000006862122,0.0002668419,0.0002196502,0.00009463052,0.0006515035,0.0003736927,0.0000589087,0.0004623704,0.000005975833],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971861,0.0003415083,0.001170179,0.00003712924,0.000004504614,0.000006281748,0.000984199,0.0000144484,0.0002555261],"genre_scores_gemma":[0.9946929,0.0001862852,0.002771416,0.0000271812,0.000006036393,0.0000306163,0.001710462,0.00001059181,0.0005645953],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005300339,"threshold_uncertainty_score":0.010539,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0203586148735274,"score_gpt":0.241750390286963,"score_spread":0.2213917754134355,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}