{"id":"W3109467684","doi":"10.3390/cancers12123627","title":"Detection of Structural Variants in Circulating Cell-Free DNA from Sarcoma Patients Using Next Generation Sequencing","year":2020,"lang":"en","type":"article","venue":"Cancers","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Queen's University; Sarcoma UK; Deutschen Konsortium für Translationale Krebsforschung; Queen's University Belfast; Deutsches Krebsforschungszentrum","keywords":"Alveolar soft part sarcoma; Sarcoma; Liposarcoma; Myxoid liposarcoma; Synovial sarcoma; Soft tissue sarcoma; Alveolar rhabdomyosarcoma; Clear-cell sarcoma; Medicine; Pathology; DNA sequencing; Cell-free fetal DNA; Cancer research; DNA; Biology; Rhabdomyosarcoma; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004719277,0.0002873492,0.0002773799,0.0009346945,0.0002325289,0.0006404555,0.0001794104,0.0004419705,0.0009876414],"category_scores_gemma":[0.001869957,0.0001658644,0.000211392,0.0005127278,0.0002060986,0.0001967623,0.0002914887,0.0003207466,0.0003109883],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001795018,"about_ca_system_score_gemma":0.0001687161,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001095679,"about_ca_topic_score_gemma":0.001672265,"domain_scores_codex":[0.9994542,0.00008697247,0.00005698357,0.0002095138,0.0001526659,0.00003968735],"domain_scores_gemma":[0.9994013,0.0002472039,0.000114623,0.00006117798,0.0001136968,0.00006198124],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0007076833,0.0001148098,0.7026622,0.0001514087,0.0001961561,0.001889432,0.0007196639,0.00117584,0.2306177,0.0002889155,0.001120314,0.06035573],"study_design_scores_gemma":[0.0001429539,0.001342492,0.8311625,0.0001246149,0.0003076106,0.02216408,0.0007228695,0.01043804,0.1185881,0.001575882,0.01336239,0.00006839902],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9925706,0.0007445159,0.004818407,0.0001291968,0.00002682317,0.00003610178,0.0009419392,0.00005241784,0.0006799545],"genre_scores_gemma":[0.9917011,0.000517167,0.005353883,0.0001652722,0.00003214795,0.00003708657,0.001543099,0.00002150832,0.0006287823],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001095679,"threshold_uncertainty_score":0.003304005,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03611892418647416,"score_gpt":0.2343538437228163,"score_spread":0.1982349195363422,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}