{"id":"W3109816058","doi":"10.1038/s42003-020-01474-3","title":"Ubiquitination of phytoene synthase 1 precursor modulates carotenoid biosynthesis in tomato","year":2020,"lang":"en","type":"article","venue":"Communications Biology","topic":"Antioxidant Activity and Oxidative Stress","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Botany, Chinese Academy of Sciences; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Chinese Academy of Sciences; Institute of Genetics; National Natural Science Foundation of China","keywords":"Phytoene synthase; Carotenoid; Ubiquitin ligase; Phytoene; Biochemistry; Biosynthesis; Ubiquitin; DNA ligase; Biology; Phytoene desaturase; Enzyme; Lysine; Plastid; Amino acid; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000113902,0.00008638897,0.0002796504,0.0001073472,0.00004676056,0.000002726565,0.0002823192,0.00009485681,0.00005499804],"category_scores_gemma":[0.0005641541,0.0000805654,0.0000560014,0.0003006266,0.0002871746,0.00006252268,0.0001636308,0.0001523354,0.00001698953],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000022792,"about_ca_system_score_gemma":0.0000427879,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000054459,"about_ca_topic_score_gemma":0.00005048301,"domain_scores_codex":[0.9992397,0.0001997122,0.0002503377,0.0001501339,0.00004381162,0.0001162584],"domain_scores_gemma":[0.9988552,0.0003033345,0.0001213005,0.0005696318,0.00009814005,0.00005241868],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002472819,0.0008261717,0.09126555,0.0001937533,0.0001058871,0.000002767689,0.001927541,0.00001450001,0.8633075,0.01273521,0.0001280688,0.02924581],"study_design_scores_gemma":[0.001353909,0.0005656014,0.1462674,0.0002720418,0.00009500195,0.00001294342,0.0009129777,0.01154902,0.8347349,0.0009696953,0.003023409,0.000243181],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.981559,0.0009937114,0.0007343871,0.01302887,0.00001575052,0.0003070515,0.00006466166,0.00004449127,0.003252109],"genre_scores_gemma":[0.9957218,0.000429169,0.0034611,0.0002069574,0.0000188887,0.00003120247,0.000102149,0.000008494743,0.00002020245],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0550018,"threshold_uncertainty_score":0.3285362,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06614335370583507,"score_gpt":0.3317457385745911,"score_spread":0.265602384868756,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}