{"id":"W3110279149","doi":"10.1101/2020.12.03.409698","title":"Sources of genomic diversity in the self-fertile plant pathogen, <i>Sclerotinia sclerotiorum</i> , and consequences for resistance breeding","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Plant pathogens and resistance mechanisms","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Sclerotinia sclerotiorum; Mycelium; Population; Genetics; Genetic diversity; Canola; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001703646,0.0001511605,0.0002180081,0.000928262,0.0003194597,0.0004657699,0.0002085468,0.0002336771,0.0008053581],"category_scores_gemma":[0.0003258167,0.0001151286,0.0001603595,0.0006803961,0.0003416771,0.00009988782,0.0002495873,0.0002134072,0.0001247226],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005208669,"about_ca_system_score_gemma":0.000406165,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02284044,"about_ca_topic_score_gemma":0.05200242,"domain_scores_codex":[0.9997723,0.00003323022,0.00001336243,0.00008458455,0.00005195769,0.00004460022],"domain_scores_gemma":[0.9995949,0.00007172842,0.000115679,0.00002653896,0.00008920968,0.0001019679],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004034032,0.00005916598,0.6057069,0.00005966233,0.0001385765,0.0003864683,0.001053541,0.0002186779,0.383209,0.0002189663,0.00012077,0.008424878],"study_design_scores_gemma":[0.000003053189,0.0000381348,0.9969242,0.000005188486,0.00001742896,0.0001856801,0.0002701147,0.0001806421,0.002037236,0.00003740288,0.0002973939,0.000003449885],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994116,0.00006019091,0.0001317763,0.00000923585,6.161065e-7,0.000002561786,0.0001824992,0.000003131414,0.0001983195],"genre_scores_gemma":[0.9992769,0.00002936022,0.0001599455,0.0000110851,0.000001086474,0.000001895804,0.0003603015,0.000002022705,0.000157438],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02284044,"threshold_uncertainty_score":0.04541498,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03184810663832404,"score_gpt":0.1881437376318209,"score_spread":0.1562956309934969,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}