{"id":"W3110324003","doi":"10.1139/gen-2020-0129","title":"The chicken model organism for epigenomic research","year":2020,"lang":"en","type":"review","venue":"Genome","topic":"Livestock and Poultry Management","field":"Agricultural and Biological Sciences","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Research Institute in Oncology and Hematology; CancerCare Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; CancerCare Manitoba Foundation; Research Manitoba","keywords":"Biology; Epigenome; Organism; Genome; Model organism; Genomics; Epigenomics; Computational biology; Epigenetics; Genetics; Comparative genomics; Domestication; Gene; Human genome; Evolutionary biology; DNA methylation; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007256453,0.0002094669,0.0004884104,0.00001093846,0.0009338408,0.000165884,0.001059747,0.0001437379,0.0000721117],"category_scores_gemma":[0.00005122971,0.00005479319,0.0002873034,0.0003068418,0.00006365337,0.00002516305,0.00038223,0.000311385,0.0005572705],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000910971,"about_ca_system_score_gemma":0.00005788858,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001627153,"about_ca_topic_score_gemma":0.00002873003,"domain_scores_codex":[0.9984442,0.0001657368,0.0002910368,0.0004122109,0.0002154534,0.0004713778],"domain_scores_gemma":[0.9990326,0.0005783309,0.00009856559,0.0001222452,0.00005558916,0.0001126301],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000003308858,0.00001011351,8.136686e-8,0.0004970149,0.00005201878,0.000001394976,0.00005262521,0.000002182234,0.00007152493,0.001956871,0.00134671,0.9960061],"study_design_scores_gemma":[0.00002051487,0.0001060429,0.000008638106,0.00009186945,0.00006019183,0.000001384767,0.00004400507,0.00001413457,2.42696e-7,0.001776347,0.9977177,0.000158873],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00002088424,0.9949896,0.0000116465,0.001218628,0.0001096578,0.001782515,0.0002237308,0.00003698513,0.001606293],"genre_scores_gemma":[0.00001877657,0.991129,0.00008161738,0.00006446158,0.001025934,0.0003493992,0.0002293686,0.000003564492,0.007097883],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.996371,"threshold_uncertainty_score":0.7182443,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2296644246040428,"score_gpt":0.3673595915120058,"score_spread":0.137695166907963,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}