{"id":"W3110526712","doi":"10.1080/19490976.2020.1847976","title":"Ulcerative Colitis-associated <i>E. coli</i> pathobionts potentiate colitis in susceptible hosts","year":2020,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Canada; Agence Nationale de la Recherche; CH.I.L.D. Foundation; BC Children's Hospital","keywords":"Colitis; Ulcerative colitis; Microbiology; Biology; Dysbiosis; Immunology; Inflammation; Bacterial adhesin; Inflammatory bowel disease; Strain (injury); Irritable bowel syndrome; Escherichia coli; Gene; Gut flora; Medicine; Disease; Pathology; Gastroenterology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001480059,0.0005520912,0.000392196,0.0004093692,0.0001575603,0.0003006499,0.0001251728,0.0003590421,0.001972024],"category_scores_gemma":[0.000144423,0.0001657188,0.0003039901,0.0001859782,0.0002754671,0.0002471103,0.0003155314,0.001108935,0.0003671233],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001262032,"about_ca_system_score_gemma":0.0001540701,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000254716,"about_ca_topic_score_gemma":0.000464004,"domain_scores_codex":[0.9997564,0.00006380055,0.00002014595,0.00003429043,0.00004999141,0.00007543893],"domain_scores_gemma":[0.9996982,0.00002368118,0.00008299913,0.00002391638,0.00002035227,0.0001509792],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005322014,0.0001819158,0.0005440688,0.00005204273,0.000006658991,0.00008618498,0.00001423309,0.00003529483,0.9965422,0.00007131045,0.00007223881,0.001861593],"study_design_scores_gemma":[0.0001202145,0.006954976,0.04194384,0.00004678768,0.00007878773,0.001169681,0.000101167,0.0007577827,0.9439736,0.0001407606,0.004698477,0.00001397822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949571,0.001229002,0.0008589241,0.0002090726,0.00006282108,0.00003833527,0.0002386051,0.0001093771,0.002296696],"genre_scores_gemma":[0.9943023,0.001230698,0.001589587,0.0001568426,0.00003425634,0.00003545083,0.0002957372,0.00002644839,0.002328752],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001972024,"threshold_uncertainty_score":0.006597042,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01156424490362354,"score_gpt":0.2404607163038925,"score_spread":0.2288964714002689,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}