{"id":"W3111178730","doi":"10.1101/2020.12.07.414623","title":"Haplotype divergence supports ancient asexuality in the oribatid mite <i>Oppiella nova</i>","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Study of Mite Species","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Deutsche Forschungsgemeinschaft","keywords":"Asexuality; Biology; Haplotype; Lineage (genetic); Evolutionary biology; Ploidy; Genetics; Gene; Allele","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001138406,0.0005655158,0.000578985,0.00003863955,0.0002748956,0.0002917178,0.001584059,0.0003670352,0.0004614687],"category_scores_gemma":[0.000362568,0.0002488098,0.0001998639,0.001140634,0.0001981626,0.0001170023,0.001030175,0.0008937202,0.000218774],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001340849,"about_ca_system_score_gemma":0.0001083236,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006146083,"about_ca_topic_score_gemma":0.0003391042,"domain_scores_codex":[0.9962097,0.0003271563,0.0006353881,0.001275357,0.0008424321,0.0007100146],"domain_scores_gemma":[0.9983111,0.0002701199,0.0003879089,0.0005271844,0.0002656309,0.0002380775],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004480754,0.0004024855,0.1871674,0.0001120431,0.00006196195,0.0001816133,0.0001299078,0.00001189974,0.8026738,0.0004742794,0.008711642,0.00002812497],"study_design_scores_gemma":[0.0001352877,0.00012383,0.9444041,0.00008539885,0.00003991475,2.4833e-8,0.00005468339,0.0000267577,0.01530371,0.000007151409,0.03918629,0.0006328576],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928221,0.0008196844,0.00001234493,0.003413277,0.001291979,0.0009140616,0.0004268954,0.0002315528,0.00006814596],"genre_scores_gemma":[0.996583,0.0001811961,0.0002499588,0.002049666,0.0008272928,0.00009185561,0.000001934064,0.000007997574,0.0000070638],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7873701,"threshold_uncertainty_score":0.9999964,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03998479129922147,"score_gpt":0.2295790535623783,"score_spread":0.1895942622631568,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}