{"id":"W3111771842","doi":"10.1016/j.envpol.2020.116358","title":"Tracking gene expression, metabolic profiles, and biochemical analysis in the halotolerant basidiomycetous yeast Rhodotorula mucilaginosa EXF-1630 during benzo[a]pyrene and phenanthrene biodegradation under hypersaline conditions","year":2020,"lang":"en","type":"article","venue":"Environmental Pollution","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":41,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Sherbrooke","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Pyrene; Phenanthrene; Biodegradation; Benzo(a)pyrene; Halotolerance; Chemistry; Yeast; Biochemistry; Environmental chemistry; Food science; Microbiology; Biology; Bacteria; Organic chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000161653,0.0001993662,0.0002068288,0.00007187881,0.0002450774,0.00005037008,0.0001196777,0.00009346668,0.0004457575],"category_scores_gemma":[0.00001268599,0.0001549141,0.00005715145,0.0003362491,0.0002703039,0.0002363324,0.0001193944,0.0001342379,0.00003689553],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008820203,"about_ca_system_score_gemma":0.000004699899,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000075789,"about_ca_topic_score_gemma":0.0000305178,"domain_scores_codex":[0.998579,0.000118776,0.0003067063,0.0004600586,0.000297925,0.0002374982],"domain_scores_gemma":[0.9995848,0.00001355893,0.0001129279,0.0001531542,0.000001510553,0.0001340765],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002555679,0.00009464157,0.03139702,0.000004691124,0.00002514849,0.000003782489,0.0007126785,0.000229704,0.9669653,0.000004651765,0.00004393793,0.0004929081],"study_design_scores_gemma":[0.0004641363,0.00001487378,0.4888095,0.000005365695,0.00007463611,0.00001087051,0.0003643182,0.0006343464,0.5093479,0.000005597023,0.0001265187,0.0001418975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997588,0.0004567874,0.0002990858,0.001047916,0.0000245406,0.0003177056,0.0002219483,0.00002589536,0.00001807338],"genre_scores_gemma":[0.9984018,0.0002083953,0.0004753399,0.0004430392,0.00005465212,0.00001134914,0.0003842534,0.00001215111,0.000009004913],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4576173,"threshold_uncertainty_score":0.6317215,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01224843956587548,"score_gpt":0.2072727478331666,"score_spread":0.1950243082672911,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}