{"id":"W3112414671","doi":"10.21423/aabppro20197185","title":"Evolution of the nasopharyngeal bacterial microbiota from spring processing to 40 days after arrival at the feedlot in beef calves","year":2019,"lang":"en","type":"article","venue":"American Association of Bovine Practitioners Conference Proceedings","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; University of Alberta; University of Calgary","funders":"","keywords":"Biology; Weaning; Feedlot; Respiratory tract; Microbiology; Pneumonia; Immune system; Bovine respiratory disease; Microbiome; Commensalism; Immunology; Respiratory system; Pathogenic bacteria; Bacterial pneumonia; Bacteria; Antibiotics; Medicine; Internal medicine; Animal science; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041253,0.000148245,0.0003041526,0.0001433739,0.0001489889,0.00004752792,0.0002312054,0.0001071121,0.0007746582],"category_scores_gemma":[0.0003818601,0.0001120352,0.0001032575,0.0005375618,0.0002342846,0.0003042032,0.0002261957,0.0002992185,0.0001042532],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006100773,"about_ca_system_score_gemma":0.0002956494,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004117596,"about_ca_topic_score_gemma":0.0004817307,"domain_scores_codex":[0.9987682,0.0001090034,0.0003988063,0.0003014985,0.0001276988,0.0002948265],"domain_scores_gemma":[0.9984692,0.0001489809,0.0007515092,0.0001429432,0.0004579363,0.00002944516],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005588055,0.00009883255,0.1928718,0.00002466893,0.00005703341,6.928903e-8,0.0007440458,0.000007191145,0.804319,0.0001458245,0.0007395222,0.0004331425],"study_design_scores_gemma":[0.001055944,0.0002050762,0.87146,0.0002169208,0.00007001331,0.000003427398,0.002351079,0.00002827409,0.1200737,0.00007373057,0.004247327,0.0002145357],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957526,0.00009876277,0.000022841,0.002636816,0.0002345447,0.0004752461,0.000151333,0.00001805916,0.0006097995],"genre_scores_gemma":[0.9988275,0.00002539659,0.00005816827,0.0001106416,0.00004326849,0.00004564162,0.0000332812,0.00001296938,0.0008431172],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6842454,"threshold_uncertainty_score":0.8481964,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00689706102756769,"score_gpt":0.2414505464682092,"score_spread":0.2345534854406416,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}