{"id":"W3112468799","doi":"10.1093/neuonc/noaa222.833","title":"TBIO-05. GENOME-SCALE NUCLEOTIDE-SPECIFIC CHARACTERIZATION OF 5-HYDROXYMETHYLCYTOSINE IN PEDIATRIC CENTRAL NERVOUS SYSTEM TUMORS","year":2020,"lang":"en","type":"article","venue":"Neuro-Oncology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto General Hospital; University Health Network","funders":"","keywords":"CpG site; DNA methylation; Biology; 5-Hydroxymethylcytosine; Cancer research; Genome; Gene; Glioma; Genetics; Molecular biology; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001322481,0.0004708248,0.0007020266,0.001145453,0.0006070136,0.001220932,0.001132156,0.0004926721,0.008610165],"category_scores_gemma":[0.001866245,0.0004393106,0.0006058204,0.001753467,0.0003123123,0.0002302892,0.0008814247,0.0009017998,0.001620153],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001009076,"about_ca_system_score_gemma":0.001246889,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01416652,"about_ca_topic_score_gemma":0.01729082,"domain_scores_codex":[0.9991177,0.0001878206,0.00004400422,0.000287447,0.0002037908,0.0001593756],"domain_scores_gemma":[0.9985921,0.0002706794,0.0004624334,0.0001803062,0.0001534496,0.0003409962],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.008010298,0.0002827045,0.7823323,0.00126776,0.001100158,0.0002795868,0.0008348155,0.004463241,0.1023207,0.001520906,0.04024063,0.05734696],"study_design_scores_gemma":[0.0002624769,0.001167324,0.9079911,0.0001148932,0.0008663725,0.0009223394,0.0002932686,0.005755404,0.02703814,0.0008914909,0.05464104,0.00005627454],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.706321,0.00161301,0.01048121,0.0003746056,0.0001172646,0.0002858756,0.2690986,0.002589183,0.009119253],"genre_scores_gemma":[0.681748,0.0006228362,0.0184633,0.0004024855,0.00004536027,0.001057053,0.2896532,0.00134966,0.006658063],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01416652,"threshold_uncertainty_score":0.02880383,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01309265983652358,"score_gpt":0.2300575896977606,"score_spread":0.216964929861237,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}