{"id":"W3112539910","doi":"10.3390/microorganisms8121933","title":"The T3SS of Shigella: Expression, Structure, Function, and Role in Vacuole Escape","year":2020,"lang":"en","type":"review","venue":"Microorganisms","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Ottawa","keywords":"Shigella; Vacuole; Effector; Type three secretion system; Cell biology; Microbiology; Biology; Secretion; Shigella flexneri; Virulence; Escherichia coli; Gene; Cytoplasm; Genetics; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003595063,0.0009275948,0.0009153652,0.002099267,0.0002310392,0.0009526768,0.0005919521,0.001022256,0.002383537],"category_scores_gemma":[0.0004328571,0.0002929421,0.000307736,0.002288785,0.0004444033,0.001327611,0.0006433679,0.001481452,0.002720172],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007648254,"about_ca_system_score_gemma":0.001101624,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00107208,"about_ca_topic_score_gemma":0.001231187,"domain_scores_codex":[0.9998887,0.00001418812,0.00001497301,0.00002524604,0.00004185439,0.00001499188],"domain_scores_gemma":[0.9998324,0.00005253587,0.00002675418,0.000006090071,0.00005353257,0.00002875834],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00009052752,0.0000530918,0.0001567432,0.01530768,0.00005146163,0.0001759941,0.00005607548,0.0004053588,0.003996544,0.005273275,0.02849188,0.9459414],"study_design_scores_gemma":[0.000007649827,0.00006645636,0.0004717972,0.001553646,0.00003838731,0.0005517225,0.00002860818,0.00005328843,0.0005727268,0.001072919,0.9955706,0.00001218015],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0001210785,0.9982666,0.000130214,0.0002181352,0.0001733135,0.00000297752,0.00002055406,0.000009546964,0.001057642],"genre_scores_gemma":[0.0005077854,0.9985329,0.0001336704,0.0001137351,0.00009956933,0.000003948595,0.0000355997,0.000001585011,0.0005711608],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.002383537,"threshold_uncertainty_score":0.007973731,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009168342621565725,"score_gpt":0.2688038871397047,"score_spread":0.2596355445181389,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}