{"id":"W3113217841","doi":"10.1016/j.str.2020.11.019","title":"CryoEM map of Pseudomonas aeruginosa PilQ enables structural characterization of TsaP","year":2020,"lang":"en","type":"article","venue":"Structure","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; McMaster University; University of Toronto","funders":"Canada Research Chairs; Canadian Institutes of Health Research; Government of Ontario","keywords":"Pilus; Pseudomonas aeruginosa; Bacterial outer membrane; Secretion; Flagellum; Motility; Chemistry; Biophysics; Cell biology; Biology; Microbiology; Bacteria; Biochemistry; Escherichia coli; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00002031684,0.0001217443,0.0001703961,0.0000198307,0.00002490937,0.000005169276,0.0001253283,0.0001445219,0.0001362968],"category_scores_gemma":[0.000008168491,0.0001089263,0.00008373266,0.00006397539,0.00006493617,0.000004757972,0.00002536521,0.00006585127,6.134923e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002781286,"about_ca_system_score_gemma":0.00003202675,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000007422905,"about_ca_topic_score_gemma":0.000004438968,"domain_scores_codex":[0.9993272,0.00001959841,0.0002135707,0.0002047903,0.0001226772,0.0001121016],"domain_scores_gemma":[0.9995731,0.000001605383,0.0001333988,0.0001583979,0.00007973122,0.00005373239],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001054459,0.000004122677,0.006602606,0.0001522014,0.00003032333,8.927347e-7,0.0002296546,0.00003469543,0.9923813,0.0001589021,0.00002097551,0.0002788569],"study_design_scores_gemma":[0.0003501881,0.0001283538,0.02927378,0.000008420524,0.00002633784,0.000003614734,0.00005140731,0.0001173423,0.9648646,0.00009899691,0.004953662,0.0001232623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954113,0.0001767716,0.003765687,0.0001244164,0.0001084495,0.0001168059,0.0002143633,0.000007475713,0.00007467141],"genre_scores_gemma":[0.992212,0.00002721141,0.000486521,0.00009102053,0.0002148556,9.975366e-7,0.006907308,0.00001356523,0.00004651956],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02751669,"threshold_uncertainty_score":0.4441887,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00635122690281528,"score_gpt":0.2004752163731523,"score_spread":0.194123989470337,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}