{"id":"W3113961431","doi":"10.1002/cam4.3695","title":"Tumor infiltrating neutrophils and gland formation predict overall survival and molecular subgroups in pancreatic ductal adenocarcinoma","year":2020,"lang":"en","type":"article","venue":"Cancer Medicine","topic":"Pancreatic and Hepatic Oncology Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Vancouver General Hospital; Pancreas Centre (Canada); University of British Columbia","funders":"Terry Fox Research Institute","keywords":"MUC1; Oncology; Adenocarcinoma; Infiltration (HVAC); Gene signature; Internal medicine; Pathology; Proportional hazards model; Biology; Survival analysis; Mucin; Stromal cell; Transcriptome; Medicine; Cancer research; Gene; Gene expression; Cancer","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006190325,0.0001920388,0.0002595764,0.0004168287,0.0001433789,0.000439639,0.0001370529,0.0001919786,0.0006441508],"category_scores_gemma":[0.001080298,0.00008300749,0.0001980501,0.0003237351,0.000198786,0.0002319417,0.0003326483,0.0002497373,0.0001220565],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001900799,"about_ca_system_score_gemma":0.000149506,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004583876,"about_ca_topic_score_gemma":0.0008592739,"domain_scores_codex":[0.9998388,0.00004858662,0.00001898615,0.00003905862,0.00003360202,0.00002095084],"domain_scores_gemma":[0.9994511,0.0001662664,0.0002073288,0.00004714575,0.00005002545,0.00007811886],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006977986,0.00001617496,0.9900477,0.00002145637,0.00004585066,0.00004259554,0.00002939784,0.0002313651,0.003134367,0.00001144381,0.00006895568,0.005652894],"study_design_scores_gemma":[0.00002417605,0.0001863921,0.996414,0.000008465866,0.00008579432,0.0003226832,0.00009100466,0.001091251,0.001363868,0.0001339835,0.0002747251,0.000003689005],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992079,0.0003712006,0.0001569465,0.00001591318,0.000001645871,0.000005823835,0.0001217567,0.000003633025,0.0001152156],"genre_scores_gemma":[0.9994449,0.00007594656,0.0001672064,0.000007304158,0.000003137455,0.000007287154,0.0002462732,9.941507e-7,0.00004707007],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006441508,"threshold_uncertainty_score":0.003273845,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03427200118148665,"score_gpt":0.3102500288010701,"score_spread":0.2759780276195834,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}