{"id":"W3114162075","doi":"10.1021/acschembio.0c00765","title":"Use of Synthetic Glycolipids to Probe the Number and Position of Arabinan Chains on Mycobacterial Arabinogalactan","year":2020,"lang":"en","type":"article","venue":"ACS Chemical Biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Alberta Glycomics Centre","keywords":"Arabinogalactan; Galactan; Cell wall; Peptidoglycan; Arabinose; Mycobacterium smegmatis; Residue (chemistry); Glycolipid; Mycobacterium; Biochemistry; Biology; Galactose; Stereochemistry; Chemistry; Fermentation; Xylose; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000854493,0.0001093528,0.000172114,0.00001844544,0.00002613197,0.000008161891,0.0001509838,0.0001699321,0.00003408948],"category_scores_gemma":[0.0004501435,0.00007783161,0.00004988974,0.0001021954,0.000197705,0.000002862331,0.0001470207,0.00009635447,0.000009973229],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007416696,"about_ca_system_score_gemma":0.00002939572,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000153073,"about_ca_topic_score_gemma":0.000001582041,"domain_scores_codex":[0.999171,0.0000878108,0.0002082046,0.0002770503,0.00008277967,0.0001731148],"domain_scores_gemma":[0.9994785,0.00004576059,0.00006935692,0.0002174049,0.0000872082,0.0001017886],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007997148,0.00005146558,0.001958455,0.00002118315,0.00002271886,4.076071e-7,0.0000592135,0.00000188954,0.9941738,0.001310717,0.0002266894,0.001373757],"study_design_scores_gemma":[0.0003407394,0.0006210285,0.001679298,0.00001169655,0.000007800415,0.000006441956,0.00001134662,0.00002264941,0.9906452,0.00008189652,0.006485788,0.00008614812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960527,0.00001337198,0.0001582297,0.003178722,0.00003782587,0.0003169865,0.00004718795,0.00000544954,0.0001894738],"genre_scores_gemma":[0.9987502,0.0000284895,0.0002205413,0.0007206921,0.0001330825,0.00002533403,0.00007790823,0.000009869877,0.00003393616],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006259099,"threshold_uncertainty_score":0.3173881,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02530222960702973,"score_gpt":0.2758224401985368,"score_spread":0.2505202105915071,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}