{"id":"W3114182039","doi":"10.1111/cge.13900","title":"Molecular intrinsic versus clinical subtyping in breast cancer: A comprehensive review","year":2020,"lang":"en","type":"review","venue":"Clinical Genetics","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":103,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Ontario; Women's College Hospital; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Subtyping; Breast cancer; Computational biology; Cancer; Biology; Genetics; Oncology; Medicine; Bioinformatics; Computer science; Programming language","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.002199515,0.0007498175,0.007257272,0.0001807946,0.00004635565,0.00003384217,0.0008915158,0.001209956,0.0003807068],"category_scores_gemma":[0.003170216,0.0006510116,0.00217586,0.001435567,0.0006350031,0.00001936953,0.000810787,0.005960179,0.0007465018],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005034573,"about_ca_system_score_gemma":0.005531922,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002944754,"about_ca_topic_score_gemma":0.00001381132,"domain_scores_codex":[0.9890742,0.002789514,0.004772675,0.001611614,0.0009121264,0.0008398409],"domain_scores_gemma":[0.9923479,0.003566397,0.0008298645,0.001585245,0.0005023329,0.001168263],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002101108,0.0002137913,0.0008220435,0.07605162,0.000497521,0.001174472,0.000004220781,5.154628e-7,7.901833e-8,0.000008092838,0.009991751,0.9110258],"study_design_scores_gemma":[0.002120356,0.000628632,0.0006761666,0.1230754,0.002452746,0.0001095809,0.000004695004,0.00002367104,1.476765e-7,0.000005272322,0.8704418,0.000461486],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00005606794,0.9902067,0.000007130671,0.003517354,0.002166673,0.00339382,0.0001518467,0.00006989948,0.0004304762],"genre_scores_gemma":[0.000007741517,0.9917125,0.0005348384,0.004778534,0.002313203,0.0002797256,0.0001261038,0.0002040516,0.00004337469],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9105643,"threshold_uncertainty_score":0.9995941,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.4118269879179667,"score_gpt":0.5911137378199902,"score_spread":0.1792867499020235,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}