{"id":"W3115226913","doi":"10.3390/microorganisms8122054","title":"Presence of Infection by Mycobacterium avium subsp. paratuberculosis in the Blood of Patients with Crohn’s Disease and Control Subjects Shown by Multiple Laboratory Culture and Antibody Methods","year":2020,"lang":"en","type":"article","venue":"Microorganisms","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mycobacterium avium subspecies paratuberculosis; Serology; Antibody; Ulcerative colitis; Blood culture; Paratuberculosis; Immunology; Crohn's disease; Bacteremia; Medicine; Microbiology; Mycobacterium; Disease; Biology; Internal medicine; Tuberculosis; Pathology; Antibiotics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002405534,0.000188218,0.0003746022,0.00004718982,0.00004899623,0.00003814802,0.0000877823,0.00008026006,0.00003749468],"category_scores_gemma":[0.0005062859,0.0001220342,0.00003401276,0.0003532792,0.0001871931,0.0001492395,0.0000506557,0.0002053588,8.652425e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001113465,"about_ca_system_score_gemma":0.00007118069,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001845292,"about_ca_topic_score_gemma":0.00001836276,"domain_scores_codex":[0.9986025,0.0003210841,0.0002542802,0.0003150651,0.0002698012,0.0002372894],"domain_scores_gemma":[0.9989589,0.000231864,0.0001174724,0.0002061781,0.0002170625,0.0002685109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005093505,0.0002966507,0.5090519,0.000255534,0.0000579597,0.000009483859,0.0005689778,8.33624e-8,0.4882827,0.000001199239,0.0009215521,0.00004463137],"study_design_scores_gemma":[0.003192342,0.0005782937,0.687459,0.00005897322,0.0002271687,0.000001614229,0.00006929081,0.000009102347,0.307875,0.000001855774,0.0004321249,0.00009525541],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953999,0.001935891,0.0001623844,0.0004980883,0.00001938568,0.0008474682,0.001114903,0.00001457278,0.000007401252],"genre_scores_gemma":[0.9981436,0.0005738747,0.0003897984,0.0005540159,0.0000240021,0.00003300222,0.0002534448,0.00002056934,0.000007739827],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1804077,"threshold_uncertainty_score":0.4976409,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005965726876062672,"score_gpt":0.2608997731112064,"score_spread":0.2549340462351437,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}