{"id":"W3115999108","doi":"10.2147/idr.s281288","title":"Aspergillus Species in Lower Respiratory Tract of Hospitalized Patients from Shanghai, China: Species Diversity and Emerging Azole Resistance","year":2020,"lang":"en","type":"article","venue":"Infection and Drug Resistance","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Huashan Hospital; National Natural Science Foundation of China","keywords":"Azole; Aspergillus flavus; Biology; Microbiology; Aspergillus; Multilocus sequence typing; Internal transcribed spacer; Aspergillus niger; Aspergillus fumigatus; Antifungal; Gene; Genetics; Biotechnology; Genotype; Phylogenetic tree","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001898624,0.000199372,0.0004629414,0.00008793898,0.0002714493,0.00002084371,0.00006209055,0.00008758083,0.0001384115],"category_scores_gemma":[0.0003334336,0.0001896463,0.00009185295,0.00031377,0.0002517357,0.0002449555,0.0001503672,0.0002272761,0.000002769936],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009103842,"about_ca_system_score_gemma":0.00003175131,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001972142,"about_ca_topic_score_gemma":0.001882711,"domain_scores_codex":[0.9985043,0.00007995424,0.0003927182,0.0004662988,0.0003469737,0.000209692],"domain_scores_gemma":[0.9992604,0.0000779637,0.0001718995,0.0002161312,0.000114085,0.0001595215],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00139437,0.0001924792,0.9929377,0.0002388386,0.00002350212,0.00002279257,0.00225787,0.000001201743,0.001509757,0.0002073564,0.001091815,0.0001222908],"study_design_scores_gemma":[0.002152801,0.00007997352,0.9864423,0.000236632,0.00003629044,1.288412e-7,0.0002508099,0.000008829917,0.0006769995,0.0002136221,0.009724728,0.0001768716],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9907002,0.001986866,0.00006076747,0.0007693632,0.0001283339,0.0002828302,0.00005384113,0.00004824259,0.005969536],"genre_scores_gemma":[0.9970721,0.0007786702,0.00007893122,0.0003389181,0.00007744215,0.000002742135,0.00001074939,0.00001404681,0.001626383],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008632913,"threshold_uncertainty_score":0.7733551,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01658105113132219,"score_gpt":0.2359300157678369,"score_spread":0.2193489646365147,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}