{"id":"W3116043610","doi":"10.3390/v12121473","title":"The RNA Architecture of the SARS-CoV-2 3′-Untranslated Region","year":2020,"lang":"en","type":"article","venue":"Viruses","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Massachusetts Institute of Technology; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; National Institutes of Health; National Institute of General Medical Sciences; Chinese Academy of Sciences; Institute of Genetics; University of Texas Medical Branch","keywords":"Three prime untranslated region; Virology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Untranslated region; Coronavirus disease 2019 (COVID-19); Biology; RNA; Computational biology; Genetics; Medicine; Gene; Disease; Internal medicine; Infectious disease (medical specialty)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005899676,0.00008135882,0.00007053659,0.000004722213,0.00009780342,0.00001254293,0.0002992553,0.00007421958,0.000002596316],"category_scores_gemma":[0.0000838296,0.00004236002,0.00008276985,0.00007026888,0.0000782632,0.000001113778,0.00005178328,0.00005963379,0.000004873198],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000001326271,"about_ca_system_score_gemma":0.00002828716,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001631543,"about_ca_topic_score_gemma":0.00001687266,"domain_scores_codex":[0.9994702,0.00008789121,0.0001124374,0.0001346098,0.00008565593,0.0001092441],"domain_scores_gemma":[0.9996145,0.00001767939,0.00006426983,0.0002649654,0.0000206634,0.00001790166],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009084122,0.000005189459,0.00004600146,0.000006588887,0.00002544826,7.190538e-7,0.00006786173,0.000007724549,0.9906626,0.0001743592,0.001422972,0.007489663],"study_design_scores_gemma":[0.00008735323,0.00006474309,0.00005560363,0.000007978401,0.000008990493,0.000003122269,0.00001255641,0.00000417602,0.8427523,0.0003141829,0.1566389,0.00005015148],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9899807,0.002028502,0.002553602,0.004276409,0.00013109,0.0002364996,0.00001234052,0.00001401574,0.0007668535],"genre_scores_gemma":[0.9968897,0.0001844375,0.0001037129,0.002651504,0.0001116573,0.00000733809,0.000001419298,0.0000125154,0.00003771341],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1552159,"threshold_uncertainty_score":0.1727392,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03450150265868022,"score_gpt":0.2567436677384708,"score_spread":0.2222421650797906,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}