{"id":"W3116220988","doi":"10.1016/j.xcrm.2020.100156","title":"Delivery Mode Affects Stability of Early Infant Gut Microbiota","year":2020,"lang":"en","type":"article","venue":"Cell Reports Medicine","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":232,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Human Genome Research Institute; National Institutes of Health; Parker Institute for Cancer Immunotherapy; Broad Institute; Azrieli Foundation; Israel Science Foundation; Crohn's and Colitis Foundation of America; Harvard University; National Institute of Diabetes and Digestive and Kidney Diseases; Seres Therapeutics; Merck; Juvenile Diabetes Research Foundation United States of America; Massachusetts General Hospital","keywords":"Bacteroides; Microbiome; Vaginal delivery; Biology; Gut microbiome; Gut flora; Physiology; Pregnancy; Obstetrics; Medicine; Immunology; Bacteria; Bioinformatics; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002272725,0.0001566316,0.0003097202,0.00002585914,0.00003622219,0.000003199498,0.0001046662,0.0001377136,0.00009555389],"category_scores_gemma":[0.0001221227,0.0001294914,0.00007486553,0.00009850612,0.0001638733,0.000002488445,0.0000984498,0.0001192779,0.000003676779],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001257228,"about_ca_system_score_gemma":0.0001869933,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002472323,"about_ca_topic_score_gemma":0.00002192974,"domain_scores_codex":[0.9987575,0.00004630748,0.0004220656,0.0004236804,0.0001201846,0.0002301957],"domain_scores_gemma":[0.9989426,0.00001270071,0.0002677027,0.0004548359,0.0001133073,0.0002088686],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008054668,0.00004463372,0.01520449,0.00023732,0.00001611897,0.00005296548,0.0003915475,0.000003792804,0.9741097,0.000001637762,0.009715184,0.0001420492],"study_design_scores_gemma":[0.0006330115,0.001098142,0.02281098,0.00005754916,0.00004612559,0.00006456168,0.0001246615,0.00001423391,0.9532108,0.000007772107,0.02175305,0.0001791448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9949653,0.00162121,0.0001782757,0.000656275,0.000203136,0.0002784079,0.00001083288,0.00001348953,0.002073051],"genre_scores_gemma":[0.9981067,0.0002348913,0.0002151752,0.0009097388,0.0002513512,0.000003239552,0.0001202283,0.00001869467,0.0001399362],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02089895,"threshold_uncertainty_score":0.5280507,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01392608706050079,"score_gpt":0.2507726697080876,"score_spread":0.2368465826475868,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}