{"id":"W3116220988","doi":"10.1016/j.xcrm.2020.100156","title":"Delivery Mode Affects Stability of Early Infant Gut Microbiota","year":2020,"lang":"en","type":"article","venue":"Cell Reports Medicine","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":232,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Human Genome Research Institute; National Institutes of Health; Parker Institute for Cancer Immunotherapy; Broad Institute; Azrieli Foundation; Israel Science Foundation; Crohn's and Colitis Foundation of America; Harvard University; National Institute of Diabetes and Digestive and Kidney Diseases; Seres Therapeutics; Merck; Juvenile Diabetes Research Foundation United States of America; Massachusetts General Hospital","keywords":"Bacteroides; Microbiome; Vaginal delivery; Biology; Gut microbiome; Gut flora; Physiology; Pregnancy; Obstetrics; Medicine; Immunology; Bacteria; Bioinformatics; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007112816,0.000369985,0.0002763367,0.0004149016,0.0001856383,0.0005893703,0.000369794,0.000427344,0.007575376],"category_scores_gemma":[0.004453239,0.0002644004,0.0003741031,0.0003806843,0.0002534568,0.0004152819,0.0004557041,0.0005007894,0.001205787],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003076964,"about_ca_system_score_gemma":0.0002869909,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001573743,"about_ca_topic_score_gemma":0.001235704,"domain_scores_codex":[0.9993587,0.0001769007,0.00005264321,0.0001698546,0.000138139,0.0001036706],"domain_scores_gemma":[0.9984365,0.0005942956,0.0005668986,0.000146819,0.0001026357,0.0001528956],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.007245047,0.0002853813,0.7148332,0.00041145,0.0003161913,0.001986651,0.001267537,0.0001831829,0.1937644,0.0004775175,0.001664565,0.07756487],"study_design_scores_gemma":[0.00001652747,0.001147142,0.9830552,0.00007610121,0.000105034,0.001658696,0.0005389001,0.0002591033,0.01066209,0.0001922439,0.002265343,0.00002347882],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931109,0.002528068,0.001168611,0.0002798721,0.00006372915,0.00002738696,0.0008822403,0.00005449681,0.001884708],"genre_scores_gemma":[0.9951143,0.001136502,0.0008063889,0.0001352417,0.00001509622,0.00003585135,0.0003661498,0.00004278071,0.002347723],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007575376,"threshold_uncertainty_score":0.02534211,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01392608706050079,"score_gpt":0.2507726697080876,"score_spread":0.2368465826475868,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}