{"id":"W3116557992","doi":"10.1016/j.cub.2020.10.080","title":"Evolutionary Biology: Viral Rhodopsins Illuminate Algal Evolution","year":2020,"lang":"en","type":"letter","venue":"Current Biology","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Biology; Algae; Metagenomics; Gene; Evolutionary biology; Ecology; Computational biology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001298889,0.0005347479,0.0005830753,0.0003886714,0.0002999563,0.00003821323,0.001246772,0.001043817,0.0004016118],"category_scores_gemma":[0.0008481925,0.0004828863,0.0003020537,0.0004233545,0.001427969,0.00007196463,0.000677213,0.003187075,0.001658447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003635788,"about_ca_system_score_gemma":0.000386521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002816351,"about_ca_topic_score_gemma":0.000001200838,"domain_scores_codex":[0.9953551,0.00116113,0.0004882711,0.001507449,0.0003064812,0.001181565],"domain_scores_gemma":[0.9985215,0.0004156071,0.0002265855,0.0005415583,0.0001114063,0.0001833552],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003982861,0.00005602474,0.0006934562,0.00008225908,0.00001509263,0.00004949917,0.00003544012,5.011505e-7,0.1836872,0.001201521,0.8089334,0.005205835],"study_design_scores_gemma":[0.0003302254,0.0003643927,0.0001770106,0.00002922896,0.00002291109,0.0000323221,0.000002540065,0.0006476099,0.01340163,0.006010056,0.9784566,0.000525525],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"commentary","genre_gemma":"empirical","genre_scores_codex":[0.02472549,0.01985547,0.009971156,0.8630474,0.05225798,0.004189813,0.01310249,0.00206311,0.01078708],"genre_scores_gemma":[0.6048828,0.003389469,0.0003273354,0.3575086,0.02427725,0.0004951222,0.007676656,0.0002634443,0.001179306],"genre_candidate":"commentary","genre_consensus":null,"teacher_disagreement_score":0.5801573,"threshold_uncertainty_score":0.9997623,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09415603951282477,"score_gpt":0.359587848864571,"score_spread":0.2654318093517463,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}