{"id":"W3116882598","doi":"10.1177/1753425920980512","title":"Transcriptomic profiling of <i>Brassica napus</i> responses to <i>Pseudomonas aeruginosa</i>","year":2020,"lang":"en","type":"article","venue":"Innate Immunity","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Jasmonic acid; Pseudomonas aeruginosa; Innate immune system; Transcriptome; Brassica; Microbiology; Plant hormone; Pseudomonas syringae; Plant Immunity; Pathogen; Salicylic acid; Bacteria; Botany; Immune system; Gene; Gene expression; Arabidopsis; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002653936,0.0001778219,0.0002785572,0.00002229636,0.0002614325,0.00005136999,0.0005669502,0.00008600237,0.0002084728],"category_scores_gemma":[0.0002015755,0.00008252697,0.0001392909,0.0005659619,0.00007492023,0.0001980025,0.0001388205,0.0004009863,0.00008486412],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002303808,"about_ca_system_score_gemma":0.00002349537,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001096013,"about_ca_topic_score_gemma":0.0001778481,"domain_scores_codex":[0.9986877,0.0002854406,0.0003751247,0.000214663,0.0001571882,0.0002798147],"domain_scores_gemma":[0.9991955,0.0003045246,0.0001139324,0.0001175822,0.0001141854,0.0001542441],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004197025,0.0001185951,0.001636806,0.00001226243,0.00002083385,0.000003592259,0.000357768,0.000004086824,0.9883614,0.00004327696,0.001133536,0.007888136],"study_design_scores_gemma":[0.0001871819,0.0004593929,0.02175552,0.00004824409,0.00001504825,0.00001503435,0.0007057824,0.00003057566,0.9153842,0.00003983837,0.06113172,0.0002274551],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9927144,0.0001225156,0.00001506869,0.004842929,0.0001617152,0.0002519988,0.0003971504,0.00009833,0.001395859],"genre_scores_gemma":[0.9974375,0.00004975224,0.0002981613,0.001948122,0.00008582966,0.00001305632,0.00007778177,0.000001959738,0.0000878032],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0729772,"threshold_uncertainty_score":0.3365352,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03298440152545688,"score_gpt":0.2413892763233762,"score_spread":0.2084048747979193,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}