{"id":"W3117141449","doi":"10.1111/vop.12854","title":"Current ocular microbiome investigations limit reproducibility and reliability: Critical review and opportunities","year":2020,"lang":"en","type":"review","venue":"Veterinary Ophthalmology","topic":"Ocular Infections and Treatments","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Microbiome; Workflow; Human Microbiome Project; Normalization (sociology); Gut microbiome; Computer science; Data science; Bioinformatics; Biology; Human microbiome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.01439298,0.001243094,0.002637208,0.0045892,0.0006032065,0.003148367,0.001885195,0.00234525,0.003977629],"category_scores_gemma":[0.02957016,0.0006080102,0.001658773,0.004102917,0.001667712,0.004298288,0.001468046,0.00254796,0.001532847],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001961071,"about_ca_system_score_gemma":0.008523859,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002088593,"about_ca_topic_score_gemma":0.0046294,"domain_scores_codex":[0.9953667,0.001660589,0.000995798,0.0005256392,0.001287811,0.0001635442],"domain_scores_gemma":[0.9560478,0.03187101,0.002736648,0.0007603207,0.008069857,0.0005144195],"domain_codex":null,"domain_gemma":"reproducibility","domain_candidate":"reproducibility","domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000120032,0.00004328405,0.00049668,0.10371,0.0003367134,0.0001852868,0.0003333449,0.0002652216,0.0007932051,0.005816674,0.04283739,0.8450622],"study_design_scores_gemma":[0.00001820915,0.0001422042,0.001369902,0.08381548,0.0007837808,0.0007304274,0.0004402364,0.0001356714,0.0005514253,0.005468258,0.9064828,0.00006163178],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.00006713581,0.9971244,0.0002272889,0.001669331,0.0005758907,0.00001068351,0.00002393844,0.000006392866,0.0002949179],"genre_scores_gemma":[0.0007304964,0.9972242,0.0004679901,0.0008940521,0.0004825441,0.00002176429,0.00003444159,0.000004454648,0.0001401125],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.985607,"threshold_uncertainty_score":0.07611829,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2733918102974932,"score_gpt":0.4300893553782096,"score_spread":0.1566975450807165,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}