{"id":"W3118490466","doi":"10.3389/fcell.2020.624958","title":"Determinants of Phagosomal pH During Host-Pathogen Interactions","year":2021,"lang":"en","type":"review","venue":"Frontiers in Cell and Developmental Biology","topic":"Calcium signaling and nucleotide metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Svenska Läkaresällskapet; Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Phagosome; Phagocyte; Phagocytosis; Phagolysosome; Cell biology; Intracellular; Biology; Intracellular parasite; Pathogen; Microbiology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001169119,0.0002960219,0.001020862,0.0001999982,0.00005391041,0.000009579467,0.0001660543,0.0003315707,0.00002347164],"category_scores_gemma":[0.00003734082,0.0002688156,0.0001999504,0.0001424657,0.0001204301,0.000003222445,0.0002762087,0.0001816192,0.000004080428],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003014843,"about_ca_system_score_gemma":0.0001983771,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001457173,"about_ca_topic_score_gemma":0.00001509244,"domain_scores_codex":[0.9985005,0.0001434415,0.0005400446,0.0005047824,0.00004662706,0.0002646602],"domain_scores_gemma":[0.9995284,0.00001854825,0.0002038384,0.0001544816,0.00002778196,0.00006692301],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007668094,0.0002331747,0.01539147,0.004998949,0.0002776023,0.00008097394,0.0001899614,2.692641e-7,0.08314995,0.000004785624,0.001615731,0.8939804],"study_design_scores_gemma":[0.0004628815,0.00005177528,0.0002130704,0.0009867654,0.0001101037,0.0001891651,0.0001825514,0.000001122806,0.02669832,0.000005274594,0.9706883,0.0004106036],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.06924938,0.9290935,0.00004660996,0.000001116206,0.0009350399,0.0001705471,0.0001194588,0.000004725593,0.0003796157],"genre_scores_gemma":[0.002883383,0.9919149,0.004034766,0.00001483162,0.0001154852,0.00003603094,0.0004492639,0.00002941625,0.0005219135],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9690726,"threshold_uncertainty_score":0.9999764,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01566059364335009,"score_gpt":0.2830899892506679,"score_spread":0.2674293956073178,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}