{"id":"W3118497204","doi":"10.3389/fmicb.2020.596828","title":"Markers to Rapidly Distinguish Bacillus paralicheniformis From the Very Close Relative, Bacillus licheniformis","year":2021,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministry of Agriculture, Food and Rural Affairs; University of Guelph","funders":"","keywords":"Bacillus licheniformis; Biology; Bacillus (shape); Ribosomal RNA; Genetics; GenBank; Operon; Genotype; Microbiology; 16S ribosomal RNA; Genotyping; Gene; Single-nucleotide polymorphism; Escherichia coli; Bacteria; Bacillus subtilis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004779882,0.0003365875,0.0004449605,0.00007144095,0.0001832544,0.00005886297,0.0006082847,0.000471995,0.0002140093],"category_scores_gemma":[0.0009701793,0.0002753396,0.0002133854,0.0003771695,0.0003059297,0.00001072829,0.000502196,0.0003885475,0.00008218936],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001036414,"about_ca_system_score_gemma":0.0002629629,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002315383,"about_ca_topic_score_gemma":0.0006357546,"domain_scores_codex":[0.9973541,0.000407638,0.0004789567,0.0008679426,0.0001047429,0.000786544],"domain_scores_gemma":[0.9986002,0.00009888388,0.0001044936,0.0008170276,0.0001962879,0.0001830571],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008957873,0.00007635287,0.01919881,0.00001321836,0.0002375539,0.00005384929,0.0003324587,0.00001676579,0.8354654,0.00005381934,0.1279718,0.01568415],"study_design_scores_gemma":[0.001454745,0.0002432023,0.007484904,0.00003448447,0.00002991748,0.0000425266,0.0003955813,0.00001831909,0.09673161,0.0005101369,0.8925678,0.0004867987],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9809504,0.004904517,0.005023651,0.001727489,0.002492347,0.0005244229,0.001165488,0.0000221996,0.00318947],"genre_scores_gemma":[0.9660015,0.001652688,0.0182162,0.003411842,0.001125485,0.0001167052,0.003251936,0.00009234573,0.00613129],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.764596,"threshold_uncertainty_score":0.9999699,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008608019908217437,"score_gpt":0.2357565132278932,"score_spread":0.2271484933196758,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}