{"id":"W3118512908","doi":"10.3390/toxins13010055","title":"Mapping the DNA-Binding Motif of Scabin Toxin, a Guanine Modifying Enzyme from Streptomyces scabies","year":2021,"lang":"en","type":"article","venue":"Toxins","topic":"Toxin Mechanisms and Immunotoxins","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; University of British Columbia; Brock University; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Guanine; Streptomyces coelicolor; Biology; DNA; Biochemistry; Binding site; NAD+ kinase; Base pair; Streptomyces; Enzyme; Nucleotide; Mutant; Genetics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005033872,0.0001228121,0.0001135103,0.0001028851,0.00009415388,0.00009668887,0.0001012153,0.0001807695,0.0004418879],"category_scores_gemma":[0.0001572948,0.00007944238,0.000103121,0.000152353,0.00009689322,0.0001281527,0.00006891431,0.0001902509,0.0001531502],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002096745,"about_ca_system_score_gemma":0.00009503915,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001043242,"about_ca_topic_score_gemma":0.001476569,"domain_scores_codex":[0.9999632,0.000005687831,0.000002150139,0.00001217253,0.00001137029,0.000005533293],"domain_scores_gemma":[0.9999452,0.00001150361,0.00001816965,0.00000587387,0.000007153276,0.00001217565],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003989565,0.000009154506,0.0007888416,0.00002803818,0.000002207903,0.00003464932,0.00001508946,0.0002900383,0.9973758,0.00006625769,0.00001119755,0.001338639],"study_design_scores_gemma":[0.00001187744,0.0001645751,0.02201257,0.000007160803,0.00001278467,0.0003134822,0.00004777492,0.01117115,0.9646587,0.0001041824,0.001488978,0.000006880661],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956068,0.0002670882,0.003613289,0.00001610622,0.000001948848,0.000009213175,0.00008766796,0.00001828136,0.0003795453],"genre_scores_gemma":[0.9957002,0.000111775,0.003550055,0.000007552997,6.276191e-7,0.000004708405,0.0002103648,0.000003660816,0.0004110886],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001043242,"threshold_uncertainty_score":0.002074361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02708666657294679,"score_gpt":0.2322308416870107,"score_spread":0.2051441751140639,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}