{"id":"W3119313311","doi":"10.1186/s40168-020-00946-2","title":"Lessons learned from the prenatal microbiome controversy","year":2021,"lang":"en","type":"article","venue":"Microbiome","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Microbiome; Biology; Human Microbiome Project; Skepticism; Human microbiome; Bioinformatics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001463986,0.0002290714,0.0002179313,0.00002770848,0.0002361814,0.00009408706,0.0003764514,0.0002287835,0.0002761743],"category_scores_gemma":[0.0000488415,0.0001858493,0.0001826851,0.0001835376,0.0001609026,0.000004864375,0.0003127074,0.0001852479,0.0002519909],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004757283,"about_ca_system_score_gemma":0.0003371136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001508925,"about_ca_topic_score_gemma":0.0003959936,"domain_scores_codex":[0.9984815,0.0001344106,0.0002521166,0.0006084673,0.00006553948,0.0004580042],"domain_scores_gemma":[0.998923,0.00003644412,0.00009210285,0.0007382567,0.0001146542,0.00009553465],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003955161,0.00006177455,0.0001466042,0.0000151762,0.0001013589,0.00001643554,0.0000828724,0.000001879758,0.9458723,0.00007113546,0.05132128,0.002269605],"study_design_scores_gemma":[0.0007401776,0.00004298889,0.001113159,0.00002193937,0.0000221812,0.00005672077,0.00007301621,0.000001209127,0.534357,0.00003514472,0.4633713,0.0001651825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9686816,0.008648337,0.0006020128,0.01780242,0.0007723176,0.0002962558,0.002427093,0.00004305399,0.0007269165],"genre_scores_gemma":[0.978097,0.0008882318,0.0009951361,0.005000636,0.0009075612,0.00001560165,0.005013426,0.00006248305,0.009019987],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.41205,"threshold_uncertainty_score":0.7578714,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0254697004826368,"score_gpt":0.2848734565633319,"score_spread":0.2594037560806951,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}