{"id":"W3119790233","doi":"10.1128/mra.01279-20","title":"Complete Genome Sequence of Mycobacterium orygis Strain 51145","year":2021,"lang":"en","type":"article","venue":"Microbiology Resource Announcements","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Government of Canada; Bill and Melinda Gates Foundation","keywords":"Whole genome sequencing; Biology; Mycobacterium tuberculosis; Genetics; Genome; Strain (injury); Sequence (biology); Chromosome; Mycobacterium; Comparative genomics; Genomics; Computational biology; Gene; Tuberculosis; Bacteria; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000261527,0.0006928137,0.0006309069,0.001215555,0.0005041701,0.0005787514,0.0004177154,0.0005345023,0.00389233],"category_scores_gemma":[0.0004403947,0.000236814,0.0005415817,0.001630331,0.0002380439,0.0003296787,0.0004350087,0.0005460838,0.002904188],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003409906,"about_ca_system_score_gemma":0.001177255,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006842142,"about_ca_topic_score_gemma":0.003951691,"domain_scores_codex":[0.9997703,0.0000246618,0.00002816127,0.0000631103,0.00007623489,0.00003753298],"domain_scores_gemma":[0.9998204,0.00003217151,0.00003839754,0.00002149913,0.00004578684,0.00004182085],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001420449,0.0001496702,0.004707809,0.001288292,0.00004954013,0.000817337,0.0004244619,0.0009097588,0.9496329,0.0009895088,0.006148757,0.03346148],"study_design_scores_gemma":[0.0006089329,0.001724347,0.325716,0.0006394495,0.0008156772,0.002788811,0.00105532,0.004213173,0.1822266,0.001747175,0.4782417,0.000222706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.6232266,0.01225595,0.0242278,0.001148143,0.0006169701,0.0008369406,0.319289,0.001003863,0.01739478],"genre_scores_gemma":[0.2745054,0.004482908,0.02442817,0.0003488119,0.0001131213,0.0002918301,0.6881464,0.0002300512,0.007453345],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.006842142,"threshold_uncertainty_score":0.01360464,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04606964405083489,"score_gpt":0.2973089941995338,"score_spread":0.2512393501486989,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}