{"id":"W3120116896","doi":"10.1101/2020.08.30.274571","title":"Identification of novel avian and mammalian deltaviruses provides new insights into deltavirus evolution","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Medical Science, University of Tokyo; Japan Society for the Promotion of Science; Institute of Genetics; University of Tokyo; Ministry of Education, Culture, Sports, Science and Technology","keywords":"Biology; Phylogenetic tree; Passerine; Evolutionary biology; Helper virus; Transmission (telecommunications); Virology; Coevolution; Lineage (genetic); Phylogenetics; Identification (biology); Viral evolution; Virus; Genetics; Zoology; Viral replication; Gene; Ecology; Genome","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003337389,0.0001813173,0.0001554034,0.0003986814,0.0002530852,0.0004906223,0.0001035126,0.0002539854,0.001622967],"category_scores_gemma":[0.000128057,0.0001005261,0.0001909249,0.0002316228,0.0001909589,0.0004087776,0.0002493768,0.0003273658,0.0003193494],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001680336,"about_ca_system_score_gemma":0.000167142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003634515,"about_ca_topic_score_gemma":0.0005100068,"domain_scores_codex":[0.9999453,0.000009473833,0.000005718715,0.00002183794,0.000008963138,0.000008729411],"domain_scores_gemma":[0.9998769,0.00003048568,0.00002855192,0.00001448147,0.00001993941,0.0000297038],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004361724,0.00007566316,0.1202669,0.000383921,0.00005059276,0.0008842407,0.0004513082,0.0003509289,0.8175368,0.002422814,0.0003906205,0.05675004],"study_design_scores_gemma":[0.00006256387,0.0008008199,0.6410896,0.000304202,0.0002105852,0.008276961,0.001831182,0.006409483,0.2648636,0.005278782,0.07083897,0.00003327071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9832004,0.007968307,0.004662427,0.0001876531,0.00004731449,0.00001774651,0.0003938489,0.00003638143,0.003485887],"genre_scores_gemma":[0.9815677,0.003749402,0.01013765,0.0001408932,0.00008229752,0.00001457649,0.001373163,0.00001042226,0.002923865],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001622967,"threshold_uncertainty_score":0.005429387,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02993233748048123,"score_gpt":0.2583500737866747,"score_spread":0.2284177363061935,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}