{"id":"W3121704504","doi":"10.1101/2021.01.23.427911","title":"Anaerobic Benzene Biodegradation Linked to Growth of Highly Specific Bacterial Clades","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Genome Canada; University of Waterloo; Mitacs; University of Alberta; Government of Ontario","keywords":"Biodegradation; Bioremediation; Microcosm; Benzene; Environmental chemistry; Biostimulation; Anoxic waters; Chemistry; Nitrate; Sulfate; Biology; Organic chemistry; Ecology; Contamination","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001842028,0.0002822264,0.0001621557,0.0005173516,0.0002284287,0.0003994409,0.0001780124,0.0002174484,0.0008634687],"category_scores_gemma":[0.000352668,0.0001657011,0.0001898705,0.0004026675,0.0001429612,0.0001925481,0.0004178046,0.0002717874,0.0002915518],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002835077,"about_ca_system_score_gemma":0.0003188453,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007064461,"about_ca_topic_score_gemma":0.005011739,"domain_scores_codex":[0.9997361,0.00002039273,0.00003123648,0.00007437403,0.00007159974,0.00006618976],"domain_scores_gemma":[0.9996462,0.00006123734,0.0001009908,0.000022361,0.000108536,0.00006070553],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000217745,0.00004321289,0.02548763,0.00007688456,0.000008363656,0.0000386782,0.0000618488,0.00007895622,0.9706644,0.00002793599,0.00006932169,0.003225001],"study_design_scores_gemma":[0.00001151044,0.0009304672,0.7067064,0.00002054999,0.00004741096,0.0005622424,0.0003587532,0.001075773,0.2875929,0.00007941205,0.002599282,0.00001533449],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969738,0.0003999816,0.000466315,0.00003498111,0.00001182914,0.0000304065,0.00103476,0.00001917253,0.001028784],"genre_scores_gemma":[0.9940267,0.0003312133,0.001309848,0.00004612735,0.00001025271,0.00005647062,0.002536258,0.000007515562,0.001675619],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007064461,"threshold_uncertainty_score":0.01404667,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01299109615092251,"score_gpt":0.1970160345752304,"score_spread":0.1840249384243079,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}