{"id":"W3122070792","doi":"10.1093/g3journal/jkab006","title":"Reference genome assembly for Australian<i>Ascochyta lentis</i>isolate Al4","year":2021,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Genetic and Environmental Crop Studies","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Grains Research and Development Corporation; National Cancer Institute; Australian Government; National Computational Infrastructure","keywords":"Biology; Genome; Genetics; Contig; Ascochyta; Transposable element; Synteny; Sequence assembly; Whole genome sequencing; Blight; Secondary metabolite; Gene; Botany","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000416456,0.001046982,0.0006932516,0.002764686,0.0009687034,0.0008024375,0.0009171994,0.0006500777,0.008993423],"category_scores_gemma":[0.001307741,0.0004559192,0.0009080457,0.003570285,0.0002555231,0.0005022472,0.0006932056,0.0008531705,0.005078186],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001558576,"about_ca_system_score_gemma":0.001890623,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.03724441,"about_ca_topic_score_gemma":0.03370632,"domain_scores_codex":[0.9996282,0.00004446797,0.0000366253,0.0001029848,0.0001334454,0.00005431898],"domain_scores_gemma":[0.9994819,0.00005702527,0.00009506164,0.00005805889,0.0002571609,0.00005090706],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002054338,0.0001981292,0.01050712,0.005057369,0.0002711612,0.001732022,0.00151221,0.004502744,0.8073165,0.001978538,0.0751655,0.08970437],"study_design_scores_gemma":[0.000301393,0.0006563596,0.2151515,0.0005722992,0.0009153496,0.001663816,0.0007810767,0.01999213,0.1038778,0.002447023,0.6534038,0.0002373924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.3390429,0.003640867,0.06186095,0.0009005666,0.0003381251,0.001133778,0.5572929,0.01166891,0.02412103],"genre_scores_gemma":[0.1207352,0.001641308,0.05723921,0.0001999186,0.00004507889,0.0005030232,0.805678,0.00125555,0.01270266],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.03724441,"threshold_uncertainty_score":0.07405525,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0495467307706802,"score_gpt":0.2401560350469551,"score_spread":0.1906093042762749,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}